The current study comprehensively evaluates four different protein extraction methods based on urea,sodium dodecyl sulfate(SDS),anionic surfactants(BT),and total RNA extractor(Trizol),aiming to optimize the sample pre...The current study comprehensively evaluates four different protein extraction methods based on urea,sodium dodecyl sulfate(SDS),anionic surfactants(BT),and total RNA extractor(Trizol),aiming to optimize the sample preparation workflow for mass spectrometry-based proteomics.Using HeLa cells as an example,we found that the method employing the mass spectrometry-compatible surfactant BT reagent significantly reduces the total time consumed for protein extraction and minimizes protein losses during the sample preparation process.Further integrating the four protein extraction methods,we identified over 7000 proteins from HeLa cells without relying on pre-fractionation techniques,and 2990 of them were quantified using label-free quantification.It is worth noting that the BT and SDS methods demonstrate higher efficiency in extracting membrane proteins,while the Urea and Trizol methods are more effective in extracting proteins from nuclear and cytoplasmic fractions.In summary,this study provides a novel solution for deep proteome coverage,particularly in the context of cellular protein extraction,by integrating mass spectrometry-compatible surfactants with traditional extraction methods to effectively enhance protein identification numbers.展开更多
乳铁蛋白(Lactoferrin,Lf)是分子量大小约为80 k Da的铁离子结合糖蛋白,是转铁蛋白(Transferrin,Tf)家族的成员之一。其理化性质独特,具有抑菌、抗病毒、抗癌、免疫调节、调节铁离子的吸收等诸多生物学功能。获得高产且有生物活性的重...乳铁蛋白(Lactoferrin,Lf)是分子量大小约为80 k Da的铁离子结合糖蛋白,是转铁蛋白(Transferrin,Tf)家族的成员之一。其理化性质独特,具有抑菌、抗病毒、抗癌、免疫调节、调节铁离子的吸收等诸多生物学功能。获得高产且有生物活性的重组乳铁蛋白,并用于临床治疗,一直是研究热点。随着基因工程技术的发展,已获得多个可表达重组乳铁蛋白的表达系统。本文对乳铁蛋白的理化性质、生物学活性、临床研究以及目前的重组表达系统进行综述,以期为乳铁蛋白的临床应用提供参考。展开更多
乙型肝炎病毒X蛋白(hepatitis B virus X protein,HBx)对肝癌的发生发展具有十分重要的作用.HBx具有促进肝癌迁移的作用,但其作用的分子机制不清.本研究对HBx促进肝癌细胞迁移的分子机制进行了探讨.伤口愈合和Boyden’s chamber结果表明...乙型肝炎病毒X蛋白(hepatitis B virus X protein,HBx)对肝癌的发生发展具有十分重要的作用.HBx具有促进肝癌迁移的作用,但其作用的分子机制不清.本研究对HBx促进肝癌细胞迁移的分子机制进行了探讨.伤口愈合和Boyden’s chamber结果表明,HBx可明显促进肝癌Hep G2细胞迁移.在稳定转染HBx的Hep G2(Hep G2-X)细胞中转染HBx结合蛋白(hepatitis B X-interacting protein,HBXIP)的RNA干扰片段,可明显抑制HBx的促迁移作用.免疫组化和实时定量PCR结果表明,HBXIP在肝癌组织中显著高表达,并且与HBx表达成正相关.荧光素酶报告基因和免疫印迹结果表明,HBx显著增强HBXIP的启动子活性和蛋白质表达水平.应用HBx的RNA干扰处理Hep G2-X细胞,HBXIP的启动子活性和蛋白质表达水平明显下降.将HBXIP启动子区的c AMP效应元件结合因子(CREB)结合位点突变后,HBx上调HBXIP的作用消失.应用CREB的RNA干扰处理肝癌细胞,在启动子水平和蛋白质水平上,HBx对HBXIP的上调作用被显著抑制.染色质免疫共沉淀结果表明,HBx能够通过CREB结合到HBXIP的启动子上,进而发挥激活HBXIP的功能.本研究结果表明,HBx促进肝癌细胞迁移的作用是通过CREB上调HBXIP实现的.这一发现对进一步揭示HBx促进肝癌细胞迁移的分子机制具有重要意义.展开更多
文摘The current study comprehensively evaluates four different protein extraction methods based on urea,sodium dodecyl sulfate(SDS),anionic surfactants(BT),and total RNA extractor(Trizol),aiming to optimize the sample preparation workflow for mass spectrometry-based proteomics.Using HeLa cells as an example,we found that the method employing the mass spectrometry-compatible surfactant BT reagent significantly reduces the total time consumed for protein extraction and minimizes protein losses during the sample preparation process.Further integrating the four protein extraction methods,we identified over 7000 proteins from HeLa cells without relying on pre-fractionation techniques,and 2990 of them were quantified using label-free quantification.It is worth noting that the BT and SDS methods demonstrate higher efficiency in extracting membrane proteins,while the Urea and Trizol methods are more effective in extracting proteins from nuclear and cytoplasmic fractions.In summary,this study provides a novel solution for deep proteome coverage,particularly in the context of cellular protein extraction,by integrating mass spectrometry-compatible surfactants with traditional extraction methods to effectively enhance protein identification numbers.
文摘乳铁蛋白(Lactoferrin,Lf)是分子量大小约为80 k Da的铁离子结合糖蛋白,是转铁蛋白(Transferrin,Tf)家族的成员之一。其理化性质独特,具有抑菌、抗病毒、抗癌、免疫调节、调节铁离子的吸收等诸多生物学功能。获得高产且有生物活性的重组乳铁蛋白,并用于临床治疗,一直是研究热点。随着基因工程技术的发展,已获得多个可表达重组乳铁蛋白的表达系统。本文对乳铁蛋白的理化性质、生物学活性、临床研究以及目前的重组表达系统进行综述,以期为乳铁蛋白的临床应用提供参考。
基金supported by grants from Tianjin Natural Scientific Foundation(14JCZDJC32800)National Basic Research Program of China(2015CB553905)+1 种基金Hi-Tech Research and Development Program of China(2014AA020903)The National Natural Science Foundation of China(81372186)~~
文摘乙型肝炎病毒X蛋白(hepatitis B virus X protein,HBx)对肝癌的发生发展具有十分重要的作用.HBx具有促进肝癌迁移的作用,但其作用的分子机制不清.本研究对HBx促进肝癌细胞迁移的分子机制进行了探讨.伤口愈合和Boyden’s chamber结果表明,HBx可明显促进肝癌Hep G2细胞迁移.在稳定转染HBx的Hep G2(Hep G2-X)细胞中转染HBx结合蛋白(hepatitis B X-interacting protein,HBXIP)的RNA干扰片段,可明显抑制HBx的促迁移作用.免疫组化和实时定量PCR结果表明,HBXIP在肝癌组织中显著高表达,并且与HBx表达成正相关.荧光素酶报告基因和免疫印迹结果表明,HBx显著增强HBXIP的启动子活性和蛋白质表达水平.应用HBx的RNA干扰处理Hep G2-X细胞,HBXIP的启动子活性和蛋白质表达水平明显下降.将HBXIP启动子区的c AMP效应元件结合因子(CREB)结合位点突变后,HBx上调HBXIP的作用消失.应用CREB的RNA干扰处理肝癌细胞,在启动子水平和蛋白质水平上,HBx对HBXIP的上调作用被显著抑制.染色质免疫共沉淀结果表明,HBx能够通过CREB结合到HBXIP的启动子上,进而发挥激活HBXIP的功能.本研究结果表明,HBx促进肝癌细胞迁移的作用是通过CREB上调HBXIP实现的.这一发现对进一步揭示HBx促进肝癌细胞迁移的分子机制具有重要意义.
