A software and algorithm which based on random sequence model uses osmotic stress responding cis elements from existing information sources of biology was designed. It can infer the genic downstream function of Arabid...A software and algorithm which based on random sequence model uses osmotic stress responding cis elements from existing information sources of biology was designed. It can infer the genic downstream function of Arabidopsis thaliana through analyzing its promoter region, and can offer effective aided analysis to mine osmotic stress responding genes in Arabidopsis thatiana genome. The practical application proves that this software can aid to analyze vast genic data and offer important data evidence.展开更多
Cotton is the major dominant natural fiber crop on the earth.Although some current cotton genetics and breeding programs had made great progresses in cotton lint yield increases and disease resistance(tolerance),fiber...Cotton is the major dominant natural fiber crop on the earth.Although some current cotton genetics and breeding programs had made great progresses in cotton lint yield increases and disease resistance(tolerance),fiber quality has little improvement.Global understanding genes expression展开更多
目的探讨肺癌患者痰标本中FH IT、P16、MGMT、RASSF1A和APC等抑癌基因启动子异常甲基化及其联合检测在肺癌筛查及早期诊断中的价值。方法采用甲基化特异性PCR(methylation specific PCR,MSP)法,检测47例肺癌组织及对应的痰标本FHIT、P16...目的探讨肺癌患者痰标本中FH IT、P16、MGMT、RASSF1A和APC等抑癌基因启动子异常甲基化及其联合检测在肺癌筛查及早期诊断中的价值。方法采用甲基化特异性PCR(methylation specific PCR,MSP)法,检测47例肺癌组织及对应的痰标本FHIT、P16,MGMT、RASSF1A和APC基因启动子区甲基化状态。24例肺良性疾病患者痰标本作为对照。结果 47例肺癌组织标本中FHIT、P16、MGMT、RASSF1A、APC基因启动子区甲基化检出率分别为40.4%(19/47)、53.2%(25/47)、36.2%(17/47)、21.3%(10/47)和38.3%(18/47);对照的痰标本中五者甲基化检出率分别为38.3%(18/47)、48.9%(23/47)、36.2%(17/47)、17.0%(8/47)和29.8%(14/47),两组甲基化检出率存在着一致性[P>0.05;κ(0.8～1.0)]。24例肺良性病变痰标本中未检测到任何异常甲基化,与肺癌组比较差异有统计学意义(P<0.05)。五项指标联合检测可明显提高肺癌检测的灵敏度(80.9%)和特异度(100.0%)。FHIT和P16基因痰标本甲基化检出率与患者吸烟指数有相关性(P<0.05)。结论痰标本中多个肺癌相关基因甲基化联合检测有望成为肺癌筛查、早期诊断简便有效的指标。展开更多
文摘A software and algorithm which based on random sequence model uses osmotic stress responding cis elements from existing information sources of biology was designed. It can infer the genic downstream function of Arabidopsis thaliana through analyzing its promoter region, and can offer effective aided analysis to mine osmotic stress responding genes in Arabidopsis thatiana genome. The practical application proves that this software can aid to analyze vast genic data and offer important data evidence.
基金This work was supported by grants fromthe China National Basic Research Program(2004CB117306)
文摘Cotton is the major dominant natural fiber crop on the earth.Although some current cotton genetics and breeding programs had made great progresses in cotton lint yield increases and disease resistance(tolerance),fiber quality has little improvement.Global understanding genes expression
文摘目的探讨肺癌患者痰标本中FH IT、P16、MGMT、RASSF1A和APC等抑癌基因启动子异常甲基化及其联合检测在肺癌筛查及早期诊断中的价值。方法采用甲基化特异性PCR(methylation specific PCR,MSP)法,检测47例肺癌组织及对应的痰标本FHIT、P16,MGMT、RASSF1A和APC基因启动子区甲基化状态。24例肺良性疾病患者痰标本作为对照。结果 47例肺癌组织标本中FHIT、P16、MGMT、RASSF1A、APC基因启动子区甲基化检出率分别为40.4%(19/47)、53.2%(25/47)、36.2%(17/47)、21.3%(10/47)和38.3%(18/47);对照的痰标本中五者甲基化检出率分别为38.3%(18/47)、48.9%(23/47)、36.2%(17/47)、17.0%(8/47)和29.8%(14/47),两组甲基化检出率存在着一致性[P>0.05;κ(0.8～1.0)]。24例肺良性病变痰标本中未检测到任何异常甲基化,与肺癌组比较差异有统计学意义(P<0.05)。五项指标联合检测可明显提高肺癌检测的灵敏度(80.9%)和特异度(100.0%)。FHIT和P16基因痰标本甲基化检出率与患者吸烟指数有相关性(P<0.05)。结论痰标本中多个肺癌相关基因甲基化联合检测有望成为肺癌筛查、早期诊断简便有效的指标。
