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Genome-wide analysis of the bHLH family and identification of bHLH genes involved in fruit development and ripening of cultivated octoploid strawberry 被引量:2

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摘要 Objectives:The basic helix-loop-helix(bHLH)transcription factors(TFs)regulate fruit growth in many plants.However,there is no available study on the bHLH gene family in the haplotype-resolved genome of cultivated strawberry(Fragaria×ananassa).Materials and Methods:The 131 FabHLH genes identifed in the strawberry cultivar‘Yanli’haplotype-resolved genome were classifed into 24 subfamilies according to their phylogenetic relationships.Gene structure,conserved motifs,and chromosomal locations were investigated using bioinformatics.Results:In total,15 FabHLH genes potentially involved in fruit development were screened based on transcriptome analysis of different stages of fruit development.We also identifed the cis-regulatory elements of these 15 FabHLH genes,predicted upstream transcription factors,and identifed protein-protein interactions.Conclusions:The fndings of this study improve our understanding of the regulation mediated by bHLH TFs during strawberry fruit growth and maturation.
出处 《Food Quality and Safety》 SCIE CAS CSCD 2024年第2期390-403,共14页 食品品质与安全研究(英文版)
基金 supported by the National Natural Science Foundation of China(Nos.32130092,31872072,and 32102350) the Liaoning Provincial Department of Education Scientifc Research Funding Project(No.LJKZ0635),China.
作者简介 Correspondence to:Yan Wang,E-mail:wangyan2019@syau.edu.cn。
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