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猪圆环病毒Ⅰ型TaqMan荧光定量PCR检测方法的建立 被引量:2

Development of a taqman-based real-time quantitative PCR assay for detection of porcine circovirus type 1
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摘要 为了建立一种用于检测猪圆环病毒Ⅰ型(PCV-1)的Taq Man荧光定量PCR检测方法,试验以PCV-1 ORF1为靶基因,以PCV-1全基因质粒为标准品,同时还对该方法进行了特异性、敏感性、重复性试验以及临床样品检测。结果表明:该方法检测灵敏度可达5.12拷贝/μL,比常规PCR方法高10倍;线性相关系数(R2)为0.997,扩增效率为104.92%,显示出良好的线性关系和扩增效率;重复性试验的变异系数小于2%,与其他病毒无交叉反应;临床样品检测显示,该方法的检测灵敏度高于普通PCR。说明新建立的方法敏感性高、特异性强,可用于PCV-1检测。 In the current study, a taqman based real - time quantitative PCR(qPCR) assay was developed for detection of porcine circovirus type 1 ( PCV - 1 ). The primers and probe were designed according to the conserved nucleotide sequences of ORF1 gene of PCV - 1. The recom-binant plasmid containing the complete PCV - 1 genome sequence was constructed as a standard control. The sensitivity, specificity and repeat- ability of the qPCR were evaluated, respectively. Results indicated that the Limit of detection was 5.12 copies/μL ,which is higher with 10 fold than that of the conventional PCR. The R2 value of the qPCR standard curve was 0. 997; amplification efficiency of the qPCR was 104.92% ; the qPCR had a good linear response and high qpcr amplification efficiency. The coefficient of variation was less than 2 % ; the qPCR was specific for detection of PCV - 1. The results indicated that the developed qPCR assay had a potential use for rapid detection of PCV-1.
出处 《黑龙江畜牧兽医》 CAS 北大核心 2017年第5期168-171,共4页 Heilongjiang Animal Science And veterinary Medicine
基金 科技部科技基础性工作专项(2013FY113300-6)
关键词 猪圆环病毒I型(PCV-1) TAQMAN探针 荧光定量PCR 检测 pig Porcine circovirus type 1 TaqMan probe real - time quantitative PCR assay
作者简介 原霖(1982-),男,兽医师,硕士,研究方向为动物疫病诊断技术,6428949@163.com. 通信作者:翟新验(1968-),女,研究员,博士,研究方向为动物疫病诊断技术及政策,zhaixy2010@sina.cn.
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  • 1朱玲,郭万柱,徐志文,陈杨,周远成.猪圆环病毒1型和2型四川分离株全基因克隆分析[J].四川农业大学学报,2007,25(2):127-130. 被引量:3
  • 2Tischer I,Rasch R,Tochtermann G.Characterization of papovavirus and picornavirus-like particles in permanent pig kidyney cell lines[J].Zentralbl Bakterid,1974,226:153-167.
  • 3Clark E G.Post-weaning multisystemic wasting syndrome[J].Proceeding of American Association of Swine Practitioners,1997,28:499-501.
  • 4Harding J C,Clark E G.Recognizing and diagnosing Post-weaning multisystemic wasting syndrome (PMWS)[J].Swine Health Prod,1997,5:201-203.
  • 5Buhk H J,Tischer I,Koch M,et al.Cloning and sequencing of the porcine circovirus (PCV) genome[J].Zentralblatt für Bakteriologie Mikrobiologie and Hygiene Ser A Meeting Abstr,1985,260:465.
  • 6Jiseph Sambrook,David W.Russell.Molecular Cloning:A Laboratory Mannual,3rd.Cold Spring Harbor Laboratory Press,2001.
  • 7Frederick Ausubel,et al.Short Protocols in Molecular Biology[J].John Wiley and Sons Inc Publishers,2000.
  • 8Mankertz A,Mueller B,Steinfeldt T,et al.New reporter gene-based replication assay reveals exchangeability of replication factors of porcine circovirus types 1 and 2[J].J Virol,2003,77(18):9885-9893.
  • 9Meehan B, McNeilly F, Todd D, et al. Characterization of novel circovirus DNAs associated with wasting syndromes in pigs[J]. J Gen Virol, 1997, 79: 2171-2179.
  • 10Allan G M, Meehan B, Todd D, etal. Novel porcine circovirus from pigs with wasting disease syndromes[J]. Vet Rec, 1998, 142: 467-468.

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