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基于管家基因和水平转移基因的菌株亲缘性分析:60株耐药大肠埃希菌研究 被引量:5

The relatedness in 60 drug-resistant Escherichia coli strains based on the analysis of the housekeeping genes and genes acquired by horizontal transfer
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摘要 目的:了解1组(60株)耐药大肠埃希菌的菌株亲缘性。方法:对该组耐药大肠埃希菌4种与耐药相关的管家基因和45种水平转移获得与β-内酰胺类、氨基糖苷类、喹诺酮类耐药相关基因以及7种整合子、转座子、插入序列、接合性质粒遗传标记进行检测。并对检测结果进行样本聚类分析。结果:60株耐药大肠埃希菌多态性明显,多数菌株已发生演化。只有6、53号株;10、14号株,7、8、26、40号株3组携带相同基因(同一克隆)。结论:耐药基因的样本聚类分析可识别出具有相同耐药特征的菌株,具有一定的流行病学意义,为追溯耐药菌传播途径提供方便。 Objective: To investigate the relatedness in 60 drug-resistant Escherichia coli(E.coli) strains.Methods: Drug-resistance related genes were analyzed by PCR,including 4 kinds of housekeeping genes and 45 kinds of horizontal transfered genes related to 3 kinds of antimicrobial agents:beta-lactams,aminoglycosides,quinolones,as well as 7 kinds of genetic markers of integrons,transposons,insertion sequences and conjugal plasmids.They were used for the sample clustering analysis.Results: Polymorphism were distinct in 60 E.coli strains.Most strains showed evolution.Only 3 strain groups which consisted of strain 6 and 53,strain 10 and 14,strain 7,8,26 and 40,were the same clones carried the same genes.Conclusion: Sample clustering analysis of drug-resistance related genes could distinguish the strains with the same antimicrobial resistance characteristics,which was significant in epidemiologic research and provide convenience for tracing transmissible routes of drug-resistant strains.
出处 《南京医科大学学报(自然科学版)》 CAS CSCD 北大核心 2012年第1期109-114,共6页 Journal of Nanjing Medical University(Natural Sciences)
基金 江苏省实验诊断学重点实验室重大项目(XK200731)
关键词 大肠埃希菌 菌株亲缘性 Escherichia coli relatedness
作者简介 通讯作者:潘世扬。E-mail:sypan@njmu.edu.cn
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