Background Soil available phosphorus(AP)deficiency significantly limits cotton production,particularly in arid and saline-alkaline regions.Screening cotton cultivars for low phosphorus(P)tolerance is crucial for the s...Background Soil available phosphorus(AP)deficiency significantly limits cotton production,particularly in arid and saline-alkaline regions.Screening cotton cultivars for low phosphorus(P)tolerance is crucial for the sustainable development of cotton production.However,the effect of different growth media on the screening outcomes remains unclear.To address this,we evaluated the low P tolerance of 25 cotton cultivars through hydroponic culture at two P levels(0.01 and 0.5 mmol·L^(-1) KH_(2)PO_(4))in 2018 and field culture with two P rates(0 and 90 kg·hm^(-2),in P2O5)in 2019.Results In the hydroponic experiments,principal component analysis(PCA)showed that shoot dry weight(SDW)and P utilization efficiency in shoots(PUES)of cotton seedlings explained over 45%of the genetic variation in P nutri-tion.Cotton cultivars were subjected to comprehensive cluster analysis,utilizing agronomic traits(SDW and PUES)during the seedling stage(hydroponic)and yield and fiber quality traits during the mature stage(in field).These cultivars were grouped into four clusters:resistant,moderately resistant,moderately sensitive,and sensitive.In low P conditions(0.01 mmol·L^(-1) KH_(2)PO_(4) and 4.5 mg·kg^(-1) AP),the low-P-resistant cluster showed significantly smaller reduc-tions in SDW(54%),seed cotton yield(3%),lint yield(-2%),fiber length(-1)%),and fiber strength(-3%)compared with the low-P-sensitive cluster(75%,13%,17%,7%,and 9%,respectively).The increase in PUES(299%)in the resist-ant cluster was also significantly higher than in the sensitive cluster(131%).Four of the eight low-P-tolerant cotton cultivars identified in the field and six in the hydroponic screening overlapped in both screenings.Two cultivars overlapped in both screening in the low-P-sensitive cluster.Conclusion Based on the screenings from both field and hydroponic cultures,ZM-9131,CCRI-79,JM-958,and J-228 were identified as low-P-tolerant cotton cultivars,while JM-169,XM-33B,SCRC-28,and LNM-18 were identified as low P-sensitive cotton cultivars.The relationship between field and hydroponic screening results for low-P-tolerant cotton cultivars was strong,although field validation is still required.The low P tolerance of these cultivars was closely associ-ated with SDW and PUES.展开更多
Background: Nucleobase-ascorbate transporters(NAT), synonymously called nucleobase-cation symporter 2(NCS2) proteins, were earlier reported to be involved in plant growth, development and resistance to stress. Previou...Background: Nucleobase-ascorbate transporters(NAT), synonymously called nucleobase-cation symporter 2(NCS2) proteins, were earlier reported to be involved in plant growth, development and resistance to stress. Previous studies concluded that s a polymorphic SNP associated with NAT12 was significant di erent between salt-tolerant and salt-sensitive materials of upland cotton. In current study, a comprehensive analysis of NAT family genes was conducted for the first time in cotton.Results: In this study, we discovered 32, 32, 18, and 16 NAT genes in Gossypium hirsutum, G. barbadense, G. raimondii and G. arboreum, respectively, which were classified into four groups(groups I–IV) based on the multiple sequence analysis. These GhNAT genes were unevenly distributed on At and Dt sub-genome in G. hirsutum. Most GhNAT members in the same group had similar gene structure characteristics and motif composition. The collinearity analysis revealed segmental duplication as well as tandem duplication contributing to the expansion of the GhNATs. The analysis of cis-acting regulatory elements of GhNATs showed that the function of GhNAT genes in cotton might be related to plant hormone and stress response. Under di erent conditions, the expression levels further suggested the GhNAT family genes were associated with plant response to various abiotic stresses. GhNAT12 was detected in the plasma membrane. And it was validated that the GhNAT12 gene played an important role in regulating cotton resistance to salt and drought stress through the virus-induced gene silencing(VIGS) analysis.Conclusions: A comprehensive analysis of NAT gene family was performed in cotton, including phylogenetic analysis, chromosomal location, collinearity analysis, motifs, gene structure and so on. Our results will further broaden the insight into the evolution and potential functions of NAT genes in cotton. Current findings could make significant contribution towards screening more candidate genes related to biotic and abiotic resistance for the improvement in cotton.展开更多
Recentlyf Du and his team revealed the genomic basis of population differentiation and geographical distribution of Chinese cultivated G hirsutum(upland cotton).Our previous study showed that the large-scale inversion...Recentlyf Du and his team revealed the genomic basis of population differentiation and geographical distribution of Chinese cultivated G hirsutum(upland cotton).Our previous study showed that the large-scale inversions on chromosome A08 are widely distributed in a core collection of upland cotton and have driven population differentiation in G hirsutum.With 3248 tetrapioid cotton germplasms,He et al.identified new inversions on chromosome A06,and found these inversions together with those in chromosome A08 caused subpopulation differentiation Chinese cultivars that were highly con siste nt with their corresp on ding geographical distributions.This work provides new perspectives to further understand environmental adaptation of Chinese upland cotton germplasms.展开更多
Background Cotton fiber is a model tissue for studying microtubule-associated proteins(MAPs).The Xklp2(TPX2)proteins that belong to the novel MAPs member mainly participate in the formation and development of microtub...Background Cotton fiber is a model tissue for studying microtubule-associated proteins(MAPs).The Xklp2(TPX2)proteins that belong to the novel MAPs member mainly participate in the formation and development of microtubule(MT).However,there is a lack of studies concerning the systematic characterization of the TPX2 genes family in cotton.Therefore,the identification and portrayal of G.hirsutum TPX2 genes can provide key targets for molecular manipula-tion in the breeding of cotton fiber improvement.Result In this study,TPX2 family genes were classified into two distinct subclasses TPXLs and MAP genes WAVE DAMP-ENED2-LIKE(WDLs)and quite conservative in quantity.GhWDL3 was significantly up-regulated in 15 days post anthe-sis fibers of ZRI-015(an upland cotton with longer and stronger fiber).GhWDL3 promotes all stem hairs to become straight when overexpressed in Arabidopsis,which may indirectly regulate cotton fiber cell morphology during fiber development.Virus induced gene silencing(VIGS)results showed that GhWDL3 inhibited fiber cell elongation at fiber development periods through regulating the expression of cell wall related genes.Conclusion These results reveal that GhWDL3 regulated cotton fiber cell elongation and provide crucial information for the further investigation in the regulatory mechanisms/networks of cotton fiber length.展开更多
Climate deterioration,water shortages,and abiotic stress are the main threats worldwide that seriously affect cotton growth,yield,and fiber quality.Therefore,research on improving cotton yield and tolerance to biotic ...Climate deterioration,water shortages,and abiotic stress are the main threats worldwide that seriously affect cotton growth,yield,and fiber quality.Therefore,research on improving cotton yield and tolerance to biotic and abiotic stresses is of great importance.The NAC proteins are crucial and plant-specific transcription factors(TFs)that are involved in cotton growth,development,and stress responses.The comprehensive utilization of cotton NAC TFs in the improvement of cotton varieties through novel biotechnological methods is feasible.Based on cotton genomic data,genome-wide identification and analyses have revealed potential functions of cotton NAC genes.Here,we comprehensively summarize the recent progress in understanding cotton NAC TFs roles in regulating responses to drought,salt,and Verticillium wilt-related stresses,as well as leaf senescence and the development of fibers,xylem,and glands.The detailed regulatory network of NAC proteins in cotton is also elucidated.Cotton NAC TFs directly bind to the promoters of genes associated with ABA biosynthesis and secondary cell-wall formation,participate in several biological processes by interacting with related proteins,and regulate the expression of downstream genes.Studies have shown that the overexpression of NAC TF genes in cotton and other model plants improve their drought or salt tolerance.This review elucidates the latest findings on the functions and regulation of cotton NAC proteins,broadens our understanding of cotton NAC TFs,and lays a fundamental foundation for further molecular breeding research in cotton.展开更多
Background Plant hormones profoundly influence cotton growth,development,and responses to various stresses.Therefore,there is a pressing need for an efficient assay to quantify these hormones in cotton.In this groundb...Background Plant hormones profoundly influence cotton growth,development,and responses to various stresses.Therefore,there is a pressing need for an efficient assay to quantify these hormones in cotton.In this groundbreaking study,we have established QuEChERS-HPLC‒MS/MS method,for the simultaneous detection of multiple plant hormones in cotton leaves,allowing the analysis and quantification of five key plant hormones.Results Sample extraction and purification employed 0.1%acetic acid in methanol and C18 for optimal recovery of plant hormones.The method applied to cotton demonstrated excellent linearity across a concentration range of 0.05–1 mg・L−1,with linear regression coefficients exceeding 0.99.The limits of quantification(LOQs)were 20μg・kg−1 for GA3 and 5μg・kg−1 for the other four plant hormones.Recovery rates for the five plant hormones matrix spiked at levels of 5,10,100,and 1000μg・kg−1 were in the range of 79.07%to 98.97%,with intraday relative standard deviations(RSDs)ranging from 2.11%to 8.47%.The method was successfully employed to analyze and quantify the five analytes in cotton leaves treated with plant growth regulators.Conclusion The study demonstrates that the method is well-suited for the determination of five plant hormones in cotton.It exhibits excellent selectivity and sensitivity in detecting field samples,thus serving as a robust tool for indepth research into cotton physiology.展开更多
叶面积是影响植物光合作用、蒸腾作用、呼吸作用及产量形成的重要形态指标之一,为实现作物叶面积准确、稳定和无损化测量,该研究基于红外线成像设备,提供了一种利用热红外和可见光图像测定棉花叶片面积的方法。以苗期棉花作为研究对象,...叶面积是影响植物光合作用、蒸腾作用、呼吸作用及产量形成的重要形态指标之一,为实现作物叶面积准确、稳定和无损化测量,该研究基于红外线成像设备,提供了一种利用热红外和可见光图像测定棉花叶片面积的方法。以苗期棉花作为研究对象,通过红外成像相机T660获取棉花的热红外和可见光波段的图像,分别使用GrabCut算法和Hough圆检测提取红外图像中叶片和可见光图像中已知实际面积的圆状参照物(五角硬币)的像素面积,进而根据叶片区域和圆状参照物区域的像素倍数关系计算棉花的真实叶面积,将通过该研究所提方法计算的叶面积结果与传统的剪纸称重法、Image Pro Plus软件图像法进行皮尔逊相关性分析,检验该方法的可行性。分析表明,基于所提方法的测量值与剪纸称重法、Image Pro Plus软件图像法的结果之间均存在显著的线性相关关系(P<0.01)(相关系数分别为0.992,0.996)。3种方法对5盆棉花进行8次测量,结果显示,该研究所提方法测量值的平均变异系数为0.78%,在测量工作中表现稳定,为快速获取棉花苗期叶面积提供了一种准确稳健的理论方法。展开更多
Background:INDETERMINATE DOMAIN(IDD)transcription factors form one of the largest and most conserved gene families in plant kingdom and play important roles in various processes of plant growth and development,such as...Background:INDETERMINATE DOMAIN(IDD)transcription factors form one of the largest and most conserved gene families in plant kingdom and play important roles in various processes of plant growth and development,such as flower induction in term of flowering control.Till date,systematic and functional analysis of IDD genes remained infancy in cotton.Results:In this study,we identified total of 162 IDD genes from eight different plant species including 65 IDD genes in Gossypium hirsutum.Phylogenetic analysis divided IDDs genes into seven well distinct groups.The gene structures and conserved motifs of GhIDD genes depicted highly conserved exon-intron and protein motif distribution patterns.Gene duplication analysis revealed that among 142 orthologous gene pairs,54 pairs have been derived by segmental duplication events and four pairs by tandem duplication events.Further,Ka/Ks values of most of orthologous/paralogous gene pairs were less than one suggested the purifying selection pressure during evolution.Spatiotemporal expression pattern by qRT-PCR revealed that most of the investigated GhIDD genes showed higher transcript levels in ovule of seven days post anthesis,and upregulated response under the treatments of multiple abiotic stresses.Conclusions:Evolutionary analysis revealed that IDD gene family was highly conserved in plant during the rapid phase of evolution.Whole genome duplication,segmental as well as tandem duplication significantly contributed to the expansion of IDD gene family in upland cotton.Some distinct genes evolved into special subfamily and indicated potential role in the allotetraploidy Gossypium hisutum evolution and development High transcript levels of GhIDD genes in ovules illustrated their potential roles in seed and fiber development Further,upregulated responses of GhIDD genes under the treatments of various abiotic stresses suggested them as important genetic regulators to improve stress resistance in cotton breeding.展开更多
Background Cotton is extremely affected by severe natural stresses.Drought is one of the most serious abiotic stress that adversely influences cotton growth,productivity,and fiber quality.Previous studies indicate tha...Background Cotton is extremely affected by severe natural stresses.Drought is one of the most serious abiotic stress that adversely influences cotton growth,productivity,and fiber quality.Previous studies indicate that basic leucinezipper(bZIP)transcription factors are involved in the response of plants to various stresses.However,the molecular function and regulatory mechanism of GhVIP1 in response to drought stress are still unknown.Results In this research,GhVIP1 was cloned from a drought-tolerant variety.Expression of GhVIP1 was up-regulated in response to multiple abiotic stresses,especially under drought stress.And GhVIP1 was highly expressed in the root,stem,and 10 days post-anthesis ovule.Inhibiting the expression of GhVIP1 in cotton using the virus-induced gene silencing method resulted in higher electrical conductivity in leaves,but lower water content under drought stress compared with the WT plant.Overexpression of GhVIP1 in Arabidopsis enhanced plant drought tolerance through increasing the seed germination rate and improving the development of root.The exogenous expression of GhVIP1 up-regulated the transcription of genes associated with drought response and proline biosynthesis during drought stress in Arabidopsis.Conclusion In summary,these results indicated that GhVIP1 played a positive role in plants’response to drought stress.The use of GhVIP1 via modern biotechnology might facilitate the improvement of drought tolerance in cotton cultivars.展开更多
Background:The worldwide pest Aphis gossypii has three-winged morphs in its life cycle,namely,winged parthenogenetic female(WPF),winged gynopara(GP),and winged male,which are all produced by a wingless parthenogenetic...Background:The worldwide pest Aphis gossypii has three-winged morphs in its life cycle,namely,winged parthenogenetic female(WPF),winged gynopara(GP),and winged male,which are all produced by a wingless parthenogenetic female(WLPF).Most studies on A.gossypii have focused on WPF,while few have investigated GP and male.The shared molecular mechanism underlying the wing differentiation in the three wing morphs of A.gossypii remains unknown.The wing differentiation of WPF was explored in a previous study.Herein,GP and male were induced indoors.The characters of the body,internal genitals,wing veins,and fecundity of GP and male were compared with those of WPF or WLPF.Compared with WLPF,the shared and separate differentially expressed genes(DEGs)were identified in these three-wing morphs.Results:Newly-born nymphs reared in short photoperiod condition(8 L:16D,18°C)exclusively produced gynoparae(GPe)and males in adulthood successively,in which the sex ratio was GP biased.A total of 14 GPe and 9 males were produced by one mother aphid.Compared with WLPF,the three-wing morphs exhibited similar morphology and wing vein patterns but were obviously discriminated in the length of fore-and underwings,reproductive system,and fecundity.A total of 37090 annotated unigenes were obtained from libraries constructed using the four morphs via RNA sequencing(RNA-Seq).In addition,10867 and 19334 DEGs were identified in the pairwise comparison of GP versus WLPF and male versus WLPF,respectively.Compared with WLPF,the winged morphs demonstrated 2335 shared DEGs(1658 upregulated and 677 downregulated).The 1658 shared upregulated DEGs were enriched in multiple signaling pathways,including insulin,FoxO,MAPK,starch and sucrose metabolism,fatty acid biosynthesis,and degradation,suggesting their key roles in the regulation of wing plasticity in the cotton aphid.Forty-four genes that spanned the range of differential expression were chosen to validate statistical analysis based on RNA-Seq through the reverse transcription quantitative real time polymerase chain reaction(RT-qPCR).The comparison concurred with the expression pattern(either up-or downregulated)and supported the accuracy and reliability of RNA-Seq.Finally,the potential roles of DEGs related to the insulin signaling pathway in wing dimorphism were discussed in the cotton aphid.Conclusions:The present study established an efficiently standardized protocol for GP and male induction in cotton aphid by transferring newly-born nymphs to short photoperiod conditions(8 L:16D,18°C).The external morphological characters,especially wing vein patterns,were similar among WPFs,GPe,and males.However,their reproductive organs were strikingly different.Compared with WLPF,shared(2335)and exclusively(1470 in WLPF,2419 in GP,10774 male)expressed genes were identified in the three-wing morphs through RNA-Seq,and several signaling pathways that are potentially involved in their wing differentiation were obtained,including insulin signaling,starch and sucrose metabolism.展开更多
基金the Natural Science Foundation of Xinjiang Uygur Autonomous Region(2024D01A56)the National Key Research and Develop-ment Program of China(2017YFD0201906)+2 种基金the Central Research Institutes of Basic Research and the Public Service Special Foundation(1610162022044)the China Agriculture Research System(CARS-15-11)the Agricultural Sci-ence and Technology Innovation Program of Chinese Academy of Agricultural Sciences.
文摘Background Soil available phosphorus(AP)deficiency significantly limits cotton production,particularly in arid and saline-alkaline regions.Screening cotton cultivars for low phosphorus(P)tolerance is crucial for the sustainable development of cotton production.However,the effect of different growth media on the screening outcomes remains unclear.To address this,we evaluated the low P tolerance of 25 cotton cultivars through hydroponic culture at two P levels(0.01 and 0.5 mmol·L^(-1) KH_(2)PO_(4))in 2018 and field culture with two P rates(0 and 90 kg·hm^(-2),in P2O5)in 2019.Results In the hydroponic experiments,principal component analysis(PCA)showed that shoot dry weight(SDW)and P utilization efficiency in shoots(PUES)of cotton seedlings explained over 45%of the genetic variation in P nutri-tion.Cotton cultivars were subjected to comprehensive cluster analysis,utilizing agronomic traits(SDW and PUES)during the seedling stage(hydroponic)and yield and fiber quality traits during the mature stage(in field).These cultivars were grouped into four clusters:resistant,moderately resistant,moderately sensitive,and sensitive.In low P conditions(0.01 mmol·L^(-1) KH_(2)PO_(4) and 4.5 mg·kg^(-1) AP),the low-P-resistant cluster showed significantly smaller reduc-tions in SDW(54%),seed cotton yield(3%),lint yield(-2%),fiber length(-1)%),and fiber strength(-3%)compared with the low-P-sensitive cluster(75%,13%,17%,7%,and 9%,respectively).The increase in PUES(299%)in the resist-ant cluster was also significantly higher than in the sensitive cluster(131%).Four of the eight low-P-tolerant cotton cultivars identified in the field and six in the hydroponic screening overlapped in both screenings.Two cultivars overlapped in both screening in the low-P-sensitive cluster.Conclusion Based on the screenings from both field and hydroponic cultures,ZM-9131,CCRI-79,JM-958,and J-228 were identified as low-P-tolerant cotton cultivars,while JM-169,XM-33B,SCRC-28,and LNM-18 were identified as low P-sensitive cotton cultivars.The relationship between field and hydroponic screening results for low-P-tolerant cotton cultivars was strong,although field validation is still required.The low P tolerance of these cultivars was closely associ-ated with SDW and PUES.
基金supported by China Agriculture Research System of MOF and MOARAAgricultural Science and Technology Innovation Program of Chinese Academy of Agricultural Science
文摘Background: Nucleobase-ascorbate transporters(NAT), synonymously called nucleobase-cation symporter 2(NCS2) proteins, were earlier reported to be involved in plant growth, development and resistance to stress. Previous studies concluded that s a polymorphic SNP associated with NAT12 was significant di erent between salt-tolerant and salt-sensitive materials of upland cotton. In current study, a comprehensive analysis of NAT family genes was conducted for the first time in cotton.Results: In this study, we discovered 32, 32, 18, and 16 NAT genes in Gossypium hirsutum, G. barbadense, G. raimondii and G. arboreum, respectively, which were classified into four groups(groups I–IV) based on the multiple sequence analysis. These GhNAT genes were unevenly distributed on At and Dt sub-genome in G. hirsutum. Most GhNAT members in the same group had similar gene structure characteristics and motif composition. The collinearity analysis revealed segmental duplication as well as tandem duplication contributing to the expansion of the GhNATs. The analysis of cis-acting regulatory elements of GhNATs showed that the function of GhNAT genes in cotton might be related to plant hormone and stress response. Under di erent conditions, the expression levels further suggested the GhNAT family genes were associated with plant response to various abiotic stresses. GhNAT12 was detected in the plasma membrane. And it was validated that the GhNAT12 gene played an important role in regulating cotton resistance to salt and drought stress through the virus-induced gene silencing(VIGS) analysis.Conclusions: A comprehensive analysis of NAT gene family was performed in cotton, including phylogenetic analysis, chromosomal location, collinearity analysis, motifs, gene structure and so on. Our results will further broaden the insight into the evolution and potential functions of NAT genes in cotton. Current findings could make significant contribution towards screening more candidate genes related to biotic and abiotic resistance for the improvement in cotton.
文摘Recentlyf Du and his team revealed the genomic basis of population differentiation and geographical distribution of Chinese cultivated G hirsutum(upland cotton).Our previous study showed that the large-scale inversions on chromosome A08 are widely distributed in a core collection of upland cotton and have driven population differentiation in G hirsutum.With 3248 tetrapioid cotton germplasms,He et al.identified new inversions on chromosome A06,and found these inversions together with those in chromosome A08 caused subpopulation differentiation Chinese cultivars that were highly con siste nt with their corresp on ding geographical distributions.This work provides new perspectives to further understand environmental adaptation of Chinese upland cotton germplasms.
基金supported by the National Key Research and Development Program of China(2022YFD1200300)China Agriculture Research System(CARS-15-01).
文摘Background Cotton fiber is a model tissue for studying microtubule-associated proteins(MAPs).The Xklp2(TPX2)proteins that belong to the novel MAPs member mainly participate in the formation and development of microtubule(MT).However,there is a lack of studies concerning the systematic characterization of the TPX2 genes family in cotton.Therefore,the identification and portrayal of G.hirsutum TPX2 genes can provide key targets for molecular manipula-tion in the breeding of cotton fiber improvement.Result In this study,TPX2 family genes were classified into two distinct subclasses TPXLs and MAP genes WAVE DAMP-ENED2-LIKE(WDLs)and quite conservative in quantity.GhWDL3 was significantly up-regulated in 15 days post anthe-sis fibers of ZRI-015(an upland cotton with longer and stronger fiber).GhWDL3 promotes all stem hairs to become straight when overexpressed in Arabidopsis,which may indirectly regulate cotton fiber cell morphology during fiber development.Virus induced gene silencing(VIGS)results showed that GhWDL3 inhibited fiber cell elongation at fiber development periods through regulating the expression of cell wall related genes.Conclusion These results reveal that GhWDL3 regulated cotton fiber cell elongation and provide crucial information for the further investigation in the regulatory mechanisms/networks of cotton fiber length.
基金supported by the Young Scientists Fund of the National Natural Science Foundation of China(32101797)Central Public-interest Scientific Institution Basal Research Fund(No.1610162023020)。
文摘Climate deterioration,water shortages,and abiotic stress are the main threats worldwide that seriously affect cotton growth,yield,and fiber quality.Therefore,research on improving cotton yield and tolerance to biotic and abiotic stresses is of great importance.The NAC proteins are crucial and plant-specific transcription factors(TFs)that are involved in cotton growth,development,and stress responses.The comprehensive utilization of cotton NAC TFs in the improvement of cotton varieties through novel biotechnological methods is feasible.Based on cotton genomic data,genome-wide identification and analyses have revealed potential functions of cotton NAC genes.Here,we comprehensively summarize the recent progress in understanding cotton NAC TFs roles in regulating responses to drought,salt,and Verticillium wilt-related stresses,as well as leaf senescence and the development of fibers,xylem,and glands.The detailed regulatory network of NAC proteins in cotton is also elucidated.Cotton NAC TFs directly bind to the promoters of genes associated with ABA biosynthesis and secondary cell-wall formation,participate in several biological processes by interacting with related proteins,and regulate the expression of downstream genes.Studies have shown that the overexpression of NAC TF genes in cotton and other model plants improve their drought or salt tolerance.This review elucidates the latest findings on the functions and regulation of cotton NAC proteins,broadens our understanding of cotton NAC TFs,and lays a fundamental foundation for further molecular breeding research in cotton.
基金National Key R&D Program of China(2022YFD1400300)Agricultural Science and Technology Innovation Program of Chinese Academy of Agricultural SciencesChina Agriculture Research System.
文摘Background Plant hormones profoundly influence cotton growth,development,and responses to various stresses.Therefore,there is a pressing need for an efficient assay to quantify these hormones in cotton.In this groundbreaking study,we have established QuEChERS-HPLC‒MS/MS method,for the simultaneous detection of multiple plant hormones in cotton leaves,allowing the analysis and quantification of five key plant hormones.Results Sample extraction and purification employed 0.1%acetic acid in methanol and C18 for optimal recovery of plant hormones.The method applied to cotton demonstrated excellent linearity across a concentration range of 0.05–1 mg・L−1,with linear regression coefficients exceeding 0.99.The limits of quantification(LOQs)were 20μg・kg−1 for GA3 and 5μg・kg−1 for the other four plant hormones.Recovery rates for the five plant hormones matrix spiked at levels of 5,10,100,and 1000μg・kg−1 were in the range of 79.07%to 98.97%,with intraday relative standard deviations(RSDs)ranging from 2.11%to 8.47%.The method was successfully employed to analyze and quantify the five analytes in cotton leaves treated with plant growth regulators.Conclusion The study demonstrates that the method is well-suited for the determination of five plant hormones in cotton.It exhibits excellent selectivity and sensitivity in detecting field samples,thus serving as a robust tool for indepth research into cotton physiology.
文摘【目的】鉴定出能够稳定表达的棉花抗黄萎病相关数量性状位点(Quantitative trait loci,QTLs)。【方法】以抗落叶型黄萎病棉花品种常抗棉和感黄萎病品种TM-1为亲本配制的111个重组自交系家系为作图群体,筛选出多态性简单序列重复(Simple sequence repeat,SSR)标记,并用于构建遗传图谱。用完备复合区间作图法对该群体在安阳大田、新疆重病地及病圃等多个环境下的黄萎病病情指数进行QTLs检测。【结果】构建了1张含有12个连锁群、40个标记、总长212.5 cM(厘摩)的遗传图谱。获得了6个与抗黄萎病基因相关的QTLs,对数优势比(Logarithm of the odd score,LOD)分布在2.51～5.55,贡献率最大为20.34%,最小为6.93%。其中,qVR-D05-1能够在安阳大田2015年7月15日和新疆南疆重病地2016年7月9日2个环境中检测到,贡献率分别为12.96%和20.34%。【结论】本研究得到的qVR-D05-1能够为定位出稳定的棉花抗黄萎病相关QTLs提供参考。
文摘叶面积是影响植物光合作用、蒸腾作用、呼吸作用及产量形成的重要形态指标之一,为实现作物叶面积准确、稳定和无损化测量,该研究基于红外线成像设备,提供了一种利用热红外和可见光图像测定棉花叶片面积的方法。以苗期棉花作为研究对象,通过红外成像相机T660获取棉花的热红外和可见光波段的图像,分别使用GrabCut算法和Hough圆检测提取红外图像中叶片和可见光图像中已知实际面积的圆状参照物(五角硬币)的像素面积,进而根据叶片区域和圆状参照物区域的像素倍数关系计算棉花的真实叶面积,将通过该研究所提方法计算的叶面积结果与传统的剪纸称重法、Image Pro Plus软件图像法进行皮尔逊相关性分析,检验该方法的可行性。分析表明,基于所提方法的测量值与剪纸称重法、Image Pro Plus软件图像法的结果之间均存在显著的线性相关关系(P<0.01)(相关系数分别为0.992,0.996)。3种方法对5盆棉花进行8次测量,结果显示,该研究所提方法测量值的平均变异系数为0.78%,在测量工作中表现稳定,为快速获取棉花苗期叶面积提供了一种准确稳健的理论方法。
基金supported by the Major Research Plan of National Natural Science Foundation of China(NO.31690093)Creative Research Groups of China(31621005)the Agricultural Science and Technology Innovation Program Cooperation and Innovation Mission(CAAS-XTCX2016)
文摘Background:INDETERMINATE DOMAIN(IDD)transcription factors form one of the largest and most conserved gene families in plant kingdom and play important roles in various processes of plant growth and development,such as flower induction in term of flowering control.Till date,systematic and functional analysis of IDD genes remained infancy in cotton.Results:In this study,we identified total of 162 IDD genes from eight different plant species including 65 IDD genes in Gossypium hirsutum.Phylogenetic analysis divided IDDs genes into seven well distinct groups.The gene structures and conserved motifs of GhIDD genes depicted highly conserved exon-intron and protein motif distribution patterns.Gene duplication analysis revealed that among 142 orthologous gene pairs,54 pairs have been derived by segmental duplication events and four pairs by tandem duplication events.Further,Ka/Ks values of most of orthologous/paralogous gene pairs were less than one suggested the purifying selection pressure during evolution.Spatiotemporal expression pattern by qRT-PCR revealed that most of the investigated GhIDD genes showed higher transcript levels in ovule of seven days post anthesis,and upregulated response under the treatments of multiple abiotic stresses.Conclusions:Evolutionary analysis revealed that IDD gene family was highly conserved in plant during the rapid phase of evolution.Whole genome duplication,segmental as well as tandem duplication significantly contributed to the expansion of IDD gene family in upland cotton.Some distinct genes evolved into special subfamily and indicated potential role in the allotetraploidy Gossypium hisutum evolution and development High transcript levels of GhIDD genes in ovules illustrated their potential roles in seed and fiber development Further,upregulated responses of GhIDD genes under the treatments of various abiotic stresses suggested them as important genetic regulators to improve stress resistance in cotton breeding.
基金supported by the Young Scientists Fund of the National Natural Science Foundation of China(32101797)Central Public-interest Scientific Institution Basal Research Fund(No.1610162023020).
文摘Background Cotton is extremely affected by severe natural stresses.Drought is one of the most serious abiotic stress that adversely influences cotton growth,productivity,and fiber quality.Previous studies indicate that basic leucinezipper(bZIP)transcription factors are involved in the response of plants to various stresses.However,the molecular function and regulatory mechanism of GhVIP1 in response to drought stress are still unknown.Results In this research,GhVIP1 was cloned from a drought-tolerant variety.Expression of GhVIP1 was up-regulated in response to multiple abiotic stresses,especially under drought stress.And GhVIP1 was highly expressed in the root,stem,and 10 days post-anthesis ovule.Inhibiting the expression of GhVIP1 in cotton using the virus-induced gene silencing method resulted in higher electrical conductivity in leaves,but lower water content under drought stress compared with the WT plant.Overexpression of GhVIP1 in Arabidopsis enhanced plant drought tolerance through increasing the seed germination rate and improving the development of root.The exogenous expression of GhVIP1 up-regulated the transcription of genes associated with drought response and proline biosynthesis during drought stress in Arabidopsis.Conclusion In summary,these results indicated that GhVIP1 played a positive role in plants’response to drought stress.The use of GhVIP1 via modern biotechnology might facilitate the improvement of drought tolerance in cotton cultivars.
基金Central Public-interest Scientific Institution Basal Research Fund(No.1610162019020604).
文摘Background:The worldwide pest Aphis gossypii has three-winged morphs in its life cycle,namely,winged parthenogenetic female(WPF),winged gynopara(GP),and winged male,which are all produced by a wingless parthenogenetic female(WLPF).Most studies on A.gossypii have focused on WPF,while few have investigated GP and male.The shared molecular mechanism underlying the wing differentiation in the three wing morphs of A.gossypii remains unknown.The wing differentiation of WPF was explored in a previous study.Herein,GP and male were induced indoors.The characters of the body,internal genitals,wing veins,and fecundity of GP and male were compared with those of WPF or WLPF.Compared with WLPF,the shared and separate differentially expressed genes(DEGs)were identified in these three-wing morphs.Results:Newly-born nymphs reared in short photoperiod condition(8 L:16D,18°C)exclusively produced gynoparae(GPe)and males in adulthood successively,in which the sex ratio was GP biased.A total of 14 GPe and 9 males were produced by one mother aphid.Compared with WLPF,the three-wing morphs exhibited similar morphology and wing vein patterns but were obviously discriminated in the length of fore-and underwings,reproductive system,and fecundity.A total of 37090 annotated unigenes were obtained from libraries constructed using the four morphs via RNA sequencing(RNA-Seq).In addition,10867 and 19334 DEGs were identified in the pairwise comparison of GP versus WLPF and male versus WLPF,respectively.Compared with WLPF,the winged morphs demonstrated 2335 shared DEGs(1658 upregulated and 677 downregulated).The 1658 shared upregulated DEGs were enriched in multiple signaling pathways,including insulin,FoxO,MAPK,starch and sucrose metabolism,fatty acid biosynthesis,and degradation,suggesting their key roles in the regulation of wing plasticity in the cotton aphid.Forty-four genes that spanned the range of differential expression were chosen to validate statistical analysis based on RNA-Seq through the reverse transcription quantitative real time polymerase chain reaction(RT-qPCR).The comparison concurred with the expression pattern(either up-or downregulated)and supported the accuracy and reliability of RNA-Seq.Finally,the potential roles of DEGs related to the insulin signaling pathway in wing dimorphism were discussed in the cotton aphid.Conclusions:The present study established an efficiently standardized protocol for GP and male induction in cotton aphid by transferring newly-born nymphs to short photoperiod conditions(8 L:16D,18°C).The external morphological characters,especially wing vein patterns,were similar among WPFs,GPe,and males.However,their reproductive organs were strikingly different.Compared with WLPF,shared(2335)and exclusively(1470 in WLPF,2419 in GP,10774 male)expressed genes were identified in the three-wing morphs through RNA-Seq,and several signaling pathways that are potentially involved in their wing differentiation were obtained,including insulin signaling,starch and sucrose metabolism.
