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新型冠状病毒相关TMPRSS2蛋白结构特征和抗原表位分析 被引量:5
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作者 戴姿薇 唐标 《微生物学杂志》 CAS CSCD 2021年第1期58-68,共11页
采用生物信息学方法分析预测新型冠状病毒(Severe acute respiratory syndrome coronavirus 2,SARS-CoV-2)跨膜蛋白酶丝氨酸2(transmembrane protease serine 2,TMPRSS2)的理化特性、结构特征和抗原表位,为抗SARS-CoV-2药物研发提供参... 采用生物信息学方法分析预测新型冠状病毒(Severe acute respiratory syndrome coronavirus 2,SARS-CoV-2)跨膜蛋白酶丝氨酸2(transmembrane protease serine 2,TMPRSS2)的理化特性、结构特征和抗原表位,为抗SARS-CoV-2药物研发提供参考。利用ProtParam、ProtScale分析预测TMPRSS2蛋白酶的理化特性;利用COILS Server、SignalP、TMPred、TargetP Server、NetPhos Server、NetNGlyc Server服务器对TMPRSS2蛋白酶结构进行功能结构的分析预测;利用SOPMA、Pfam、SWISS MODEL分析预测TMPRSS2蛋白酶高级结构;利用IEBD分析预测TMPRSS2蛋白酶B细胞、T细胞表位。TMPRSS2蛋白酶氨基酸组成数为492个,其中丝氨酸占比最高;亲水性较高,含10个跨膜螺旋区;具有4个磷酸化位点,3个糖基化修饰点;二级结构中无规则卷曲占据主导地位,三级结构能与已知的5ce.1.1.A(SMTL ID)模型同源建模;存在13个潜在的B细胞表位,12个得分较高的T细胞表位。 展开更多
关键词 新型冠状病毒(Severe acute respiratory syndrome coronavirus 2 SARS-CoV-2) 跨膜蛋白酶丝氨酸2(transmembrane protease serine 2 TMPRSS2) 生物信息学 序列分析 抗原表位筛选
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Soluble ADAM33 determines mechanical behaviors of airway smooth muscle cells 被引量:2
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作者 Yiyuan Duan Jiaoyue Long +4 位作者 Feng Lin Jun Chen Rong Xu Xuemei Jiang Linhong Deng 《医用生物力学》 EI CAS CSCD 北大核心 2013年第S1期107-108,共2页
Introduction A disintegrin and metalloproteinase 33(ADAM33)has been identified as a susceptibility gene for asthma<sup>[1]</sup>,In particular,ADAM33 mRNA is highly expressed in airway smooth muscle cell... Introduction A disintegrin and metalloproteinase 33(ADAM33)has been identified as a susceptibility gene for asthma<sup>[1]</sup>,In particular,ADAM33 mRNA is highly expressed in airway smooth muscle cells(ASMCs)and the level of soluble ADAM33(sADAM33)is known to inversely correlate with lung function such as bronchial hyperresponsiveness(BHR)<sup>[2]</sup>that is ultimately determined by the mechanical behaviors of ASMCs.However,few have studied how sADAM33would affect ASMC mechanics.Here,we manipulated the expression of SADAM33 in 展开更多
关键词 ADAM airway BRONCHIAL asthma cultured susceptibility CORRELATE ultimately INTEGRIN transmembrane
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Distinct mechanisms of FAK mechanoactivation by different extracellular matrix proteins 被引量:1
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作者 Jihye Seong Arash Tajik +7 位作者 Jie Sun Jun-Lin Guan Martin J.Humphries Susan E.Craig Asha Shekaran Andrs J.García Ning Wang Yingxiao Wang 《医用生物力学》 EI CAS CSCD 北大核心 2013年第S1期69-71,共3页
Introduction Cells can sense and respond to the mechanical microenvironment by converting forces into biochemical signals inside the cells,i.e.mechanotransduction<sup>[1-3]</sup>.Focal adhesions are the ma... Introduction Cells can sense and respond to the mechanical microenvironment by converting forces into biochemical signals inside the cells,i.e.mechanotransduction<sup>[1-3]</sup>.Focal adhesions are the major sites of interaction between a cell and its extracellular matrix(ECM)microenvironment,thus outside mechanical signals can be sensed at focal adhesions through transmembrane receptor integrins.In particular,it has been shown that matrix elasticity can control the cell fate<sup>[4]</sup>by modulating the interactions between ECM proteins and their receptor integrins<sup>[5,6]</sup>.For example,different rigidity of polyacrylamide(PA)gels can lead to different density of ECM ancho- 展开更多
关键词 INTEGRIN CONVERTING transmembrane biochemical modulating elasticity RIGIDITY POLYACRYLAMIDE outside purchased
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Roles for α_Vβ_3 and GP Ilb/Illa integrins in MDA-MB-231cell invasion and shear flow-induced mechanotransduction
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作者 Fenglong Zhao Li Li +3 位作者 Liuyuan Guang Hong Yang Chunhui Wu Yiyao Liu 《医用生物力学》 EI CAS CSCD 北大核心 2013年第S1期51-52,共2页
Introduction Hematogenous metastasis is the mainly leading cause of death in breast carcinoma patients.A better understanding of the underlying molecular and cellular mechanisms is crucial for the development of effec... Introduction Hematogenous metastasis is the mainly leading cause of death in breast carcinoma patients.A better understanding of the underlying molecular and cellular mechanisms is crucial for the development of effective treatment for metastatic breast cancer<sup>[</sup>1].It has been well established that cell adhesion and invasion is mediated by a variety of transmembrane proteins,including integrins,cadherins,selectins,and intercellular adhesion molecules.Among these adhesion molecules,the integrins and their downstream signaling pathways have been extensively studied<sup>[2]</sup>.On the other hand,the specific events determining tumor cell interactions with endo- 展开更多
关键词 invasion ROLES for metastatic metastasis INTERCELLULAR downstream signaling underlying integrin transmembrane
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Mechanism of mechanical regulated Notch activation and structural bases of Notch NRR related T-lineage acute lymphoblastic leukemia(T-ALL)
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作者 Jizhong Lou 《医用生物力学》 EI CAS CSCD 北大核心 2013年第S1期53-54,共2页
Notch proteins are transmembrane receptors which can transduce signals between cells.Upon binding to their ligands on the neighboring cells,notch receptors can be activated and undergo conformational changes which ena... Notch proteins are transmembrane receptors which can transduce signals between cells.Upon binding to their ligands on the neighboring cells,notch receptors can be activated and undergo conformational changes which enable their proteolysis by ADAM-family of metalloproteases<sup>[1]</sup>.The cleavage site of notch protein located on its hetrodimerizaton domain(HD)of the negative regulatory region(NRR)proximal to the N-terminal of the transmembrane helix.Recent crystal structures on several notch proteins<sup>[2-4]</sup>indicated that a series of three Lin12/Notch repeats(LNRs)wrap around the HD and bury the cleavage site to prevent it from proteolysis at the normal conditions without ligand binding.Studies indicated that notch/ligand binding may al- 展开更多
关键词 NOTCH LYMPHOBLASTIC NOTCH transmembrane conformational enable BASES helix REPEATS ADAM
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Expression of Fas-estrogen receptor fusion protein in COS-7 cells
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作者 Lei Sun, Huixin Wang, Tingchong ZhouBeijing Institute of Basic Medical Sciences., Beijing 100850 《中国实验血液学杂志》 CAS CSCD 1997年第3期304-305,共2页
Anti-Fas or Fas ligand can induce apoptosis whenthey bind Fas antigen on cell surfaces, and have potentialtherapeutic uses. But the disadvantage is obvious asnormal cells can also be killed. In this paper, weconstruct... Anti-Fas or Fas ligand can induce apoptosis whenthey bind Fas antigen on cell surfaces, and have potentialtherapeutic uses. But the disadvantage is obvious asnormal cells can also be killed. In this paper, weconstructed a fusion protein between the transmembraneand cytoplasmic domains of hfas and the HBD (hormonebinding domain) of hER (referred to as MfasER).Glioma cells transfeced with MfasER could be indued 展开更多
关键词 estrogen killed CYTOPLASMIC DISADVANTAGE CYTOTOXIC POLYCLONAL referred transmembrane purified glioma
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