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Molecular simulation study of the microstructures and properties of pyridinium ionic liquid[HPy][BF_(4)]mixed with acetonitrile
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作者 XU Jian-Qiang MA Zhao-Peng +2 位作者 CHENG Si LIU Zhi-Cong ZHU Guang-Lai 《原子与分子物理学报》 CAS 北大核心 2025年第4期27-32,共6页
The microstructures and thermodynamic properties of mixed systems comprising pyridinium ionic liquid[HPy][BF_(4)]and acetonitrile at different mole fractions were studied using molecular dynamics simulation in this wo... The microstructures and thermodynamic properties of mixed systems comprising pyridinium ionic liquid[HPy][BF_(4)]and acetonitrile at different mole fractions were studied using molecular dynamics simulation in this work.The following properties were determined:density,self-diffusion coefficient,excess molar volume,and radial distribution function.The results show that with an increase in the mole fraction of[HPy][BF_(4)],the self-diffusion coefficient decreases.Additionally,the excess molar volume initially decreases,reaches a minimum,and then increases.The rules of radial distribution functions(RDFs)of characteristic atoms are different.With increasing the mole fraction of[HPy][BF_(4)],the first peak of the RDFs of HA1-F decreases,while that of CT6-CT6 rises at first and then decreases.This indicates that the solvent molecules affect the polar and non-polar regions of[HPy][BF_(4)]differently. 展开更多
关键词 Pyridinium ionic liquids Thermodynamic properties molecular dynamics simulation Radial distribution functions
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The molecular weight of carbon dots calculated from colligative properties and their application in estimating surface adsorption capacity
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作者 Ting Sun Xinzhi Liang +3 位作者 Minghao Pang Xia Xin Ning Feng Hongguang Li 《日用化学工业(中英文)》 北大核心 2025年第4期422-429,共8页
Since the discovery of carbon dots(CDs)in 2004,the unique photoluminescence phenomenon of CDs has attracted widespread attention.However,the molecular weight of CDs has not been adequately quantified at present,due to... Since the discovery of carbon dots(CDs)in 2004,the unique photoluminescence phenomenon of CDs has attracted widespread attention.However,the molecular weight of CDs has not been adequately quantified at present,due to CDs are atomically imprecise and their molecular weight distribution is broad.In this paper,a series of Pluronic-modified CDs were prepared and the structure of the CDs was briefly analyzed.Subsequently,a molecular weight measurement method based on colligative properties was developed,and the correction coefficient in the algorithm was briefly analyzed.The calculated molecular weight was applied to the determination of surface adsorption capacity.This work provided a method for averaging the molecular weight of atomically imprecise particulate materials,which is expected to provide new opportunities in related fields. 展开更多
关键词 carbon dots molecular weight colligative properties surface adsorption capacity
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Highly Stable,Antiferromagnetic MnN Films Grown by Molecular Beam Epitaxy
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作者 JI Zhuang XIAO Dongdong +2 位作者 GU Minghui MENG Meng GUO Jiandong 《真空科学与技术学报》 北大核心 2025年第8期664-672,共9页
High-quality antiferromagnetic(AFM)θ-phase manganese nitride(MnN)films were successfully grown on MgO(001)substrates by plasma-assisted molecular beam epitaxy.Structural analysis confirms the high-quality MnN film ha... High-quality antiferromagnetic(AFM)θ-phase manganese nitride(MnN)films were successfully grown on MgO(001)substrates by plasma-assisted molecular beam epitaxy.Structural analysis confirms the high-quality MnN film has a tetragonal distortion with a c/a ratio of~0.98.The film exhibits exceptional stability in both aqueous and ambient conditions,which is a crucial factor for practical applications.Electrical transport reveals its metallic behavior with an upturn at low temperatures,which could be attributed to the Kondo effect originated from nitrogen vacancy-induced magnetic impurities.Room temperature exchange bias has been demonstrated in a MnN/CoFeB heterostructure,verifying the AFM ordering of MnN.Considering its high Néel temperature~650 K,superior stability,and low-cost,this work highlights the epitaxial MnN films as a promising candidate for AFM spintronic applications. 展开更多
关键词 molecular beam epitaxy Antiferromagnetic MnN thin film Stability Kondo effect Exchange bias
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The influence ofⅤ/Ⅲratio on electron mobility of the InAs_(x)Sb_(1-x)layers grown on GaAs substrate by molecular beam epitaxy
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作者 ZHANG Jing YANG Zhi +3 位作者 ZHENG Li-Ming ZHU Xiao-Juan WANG Ping YANG Lin 《红外与毫米波学报》 北大核心 2025年第1期25-32,共8页
This paper discusses the influence of Sb/In ratio on the transport properties and crystal quality of the 200 nm InAs_(x)Sb_(1-x)thin film.The Sb content of InAs_(x)Sb_(1-x)thin film in all samples was verified by HRXR... This paper discusses the influence of Sb/In ratio on the transport properties and crystal quality of the 200 nm InAs_(x)Sb_(1-x)thin film.The Sb content of InAs_(x)Sb_(1-x)thin film in all samples was verified by HRXRD of the symmetrical 004 reflections and asymmetrical 115 reflections.The calculation results show that the Sb component was 0.6 in the InAs_(x)Sb_(1-x)thin film grown under the conditions of Sb/In ratio of 6 and As/In ratio of 3,which has the highest electron mobility(28560 cm^(2)/V·s)at 300 K.At the same time,the influence ofⅤ/Ⅲratio on the transport properties and crystal quality of Al_(0.2)In_(0.8)Sb/InAs_(x)Sb_(1-x)quantum well heterostructures also has been investigated.As a result,the Al_(0.2)In_(0.8)Sb/InAs_(0.4)Sb_(0.6)quantum well heterostructure with a channel thickness of 30 nm grown under the conditions of Sb/In ratio of 6 and As/In ratio of 3 has a maximum electron mobility of 28300 cm^(2)/V·s and a minimum RMS roughness of 0.68 nm.Through optimizing the growth conditions,our samples have higher electron mobility and smoother surface morphology. 展开更多
关键词 molecular beam epitaxy InAs_(x)Sb_(1-x) Ⅴ/Ⅲratio high electron mobility
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Molecular,cytological and morphological studies on Jassid resistance in cotton(Gossypium hirsutum L.)based on hairiness trait
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作者 SUBHASHINI Selvaraj KEERTHIVARMAN Krishnan +4 位作者 RAJESWARI Sivakami PREMALATHA N KALAIMAGAL T MUTHUSWAMI M JEYAKUMAR P 《Journal of Cotton Research》 2025年第2期205-212,共8页
Background Unravelling the relationship between trichome density and resistance to jassids in upland cotton,nine parental lines,viz.MCU 5,CO 14,CO 17,TCH 1828,KC 2,KC 3,GISV 323,GTHV 15–34,and RHC 1409 were obtained ... Background Unravelling the relationship between trichome density and resistance to jassids in upland cotton,nine parental lines,viz.MCU 5,CO 14,CO 17,TCH 1828,KC 2,KC 3,GISV 323,GTHV 15–34,and RHC 1409 were obtained from the Tamilnadu Agricultural University.These genotypes were subjected to molecular analysis using 27 primers,merely the JESPR 154 primer amplifying a 150-bp fragment in genotypes exhibiting the pubescence.Result This finding validated the association between pubescence and jassid resistance.Further analysis revealed that resistant genotypes(KC 3,GTHV 15–34,GISV 323,and RHC 1409)exhibited significantly higher trichome densities and length compared with susceptible genotypes.These results stalwartly support the hypothesis that trichomes play a pivotal role in conferring resistance to jassids in upland cotton.Conclusion By breeding cotton varieties with increased trichome density and length,it is possible to reduce jassid infestations,thereby decreasing the reliance on chemical pesticides and promoting a more sustainable agricultural environment. 展开更多
关键词 COTTON Gossypium hirsutum L. TRICHOMES Jassids molecular
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Temperature-Induced Unfolding Pathway of Staphylococcal Enterotoxin B:Insights from Circular Dichroism and Molecular Dynamics Simulation 被引量:1
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作者 LIU Ji ZHANG Shiyu +1 位作者 ZENG Yu DENG Yi 《食品科学》 EI CAS CSCD 北大核心 2024年第18期55-76,共22页
In this study,circular dichroism(CD)and molecular dynamics(MD)simulation were used to investigate the thermal unfolding pathway of staphylococcal enterotoxin B(SEB)at temperatures of 298–371 and 298–500 K,and the re... In this study,circular dichroism(CD)and molecular dynamics(MD)simulation were used to investigate the thermal unfolding pathway of staphylococcal enterotoxin B(SEB)at temperatures of 298–371 and 298–500 K,and the relationship between the experimental and simulation results were explored.Our computational findings on the secondary structure of SEB showed that at room temperature,the CD spectroscopic results were highly consistent with the MD results.Moreover,under heating conditions,the changing trends of helix,sheet and random coil obtained by CD spectral fitting were highly consistent with those obtained by MD.In order to gain a deeper understanding of the thermal stability mechanism of SEB,the MD trajectories were analyzed in terms of root mean square deviation(RMSD),secondary structure assignment(SSA),radius of gyration(R_(g)),free energy surfaces(FES),solvent-accessible surface area(SASA),hydrogen bonds and salt bridges.The results showed that at low heating temperature,domain Ⅰ without loops(omitting the mobile loop region)mainly relied on hydrophobic interaction to maintain its thermal stability,whereas the thermal stability of domain Ⅱ was mainly controlled by salt bridges and hydrogen bonds.Under high heating temperature conditions,the hydrophobic interactions in domain Ⅰ without loops were destroyed and the secondary structure was almost completely lost,while domain Ⅱ could still rely on salt bridges as molecular staples to barely maintain the stability of the secondary structure.These results help us to understand the thermodynamic and kinetic mechanisms that maintain the thermal stability of SEB at the molecular level,and provide a direction for establishing safer and more effective food sterilization processes. 展开更多
关键词 staphylococcal enterotoxin B circular dichroism molecular dynamics simulations temperature-induced unfolding
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Molecular Dynamics Simulation of Shock Response of CL-20 Co-crystals Containing Void Defects 被引量:1
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作者 Changlin Li Wei Yang +5 位作者 Qiang Gan Yajun Wang Lin Liang Wenbo Zhang Shuangfei Zhu Changgen Feng 《Defence Technology(防务技术)》 SCIE EI CAS CSCD 2024年第1期364-374,共11页
To investigate the effect of void defects on the shock response of hexanitrohexaazaisowurtzitane(CL-20)co-crystals,shock responses of CL-20 co-crystals with energetic materials ligands trinitrotoluene(TNT),1,3-dinitro... To investigate the effect of void defects on the shock response of hexanitrohexaazaisowurtzitane(CL-20)co-crystals,shock responses of CL-20 co-crystals with energetic materials ligands trinitrotoluene(TNT),1,3-dinitrobenzene(DNB),solvents ligands dimethyl carbonate(DMC) and gamma-butyrolactone(GBL)with void were simulated,using molecular dynamics method and reactive force field.It is found that the CL-20 co-crystals with void defects will form hot spots when impacted,significantly affecting the decomposition of molecules around the void.The degree of molecular fragmentation is relatively low under the reflection velocity of 2 km/s,and the main reactions are the formation of dimer and the shedding of nitro groups.The existence of voids reduces the safety of CL-20 co-crystals,which induced the sensitivity of energetic co-crystals CL-20/TNT and CL-20/DNB to increase more significantly.Detonation has occurred under the reflection velocity of 4 km/s,energetic co-crystals are easier to polymerize than solvent co-crystals,and are not obviously affected by voids.The results show that the energy of the wave decreases after sweeping over the void,which reduces the chemical reaction frequency downstream of the void and affects the detonation performance,especially the solvent co-crystals. 展开更多
关键词 CL-20 co-crystals molecular dynamics simulation Reactive forcefield Impact response Hot spot Void defect
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Revealing Al-O/Al-F reaction dynamic effects on the combustion of aluminum nanoparticles in oxygen/fluorine containing environments:A reactive molecular dynamics study meshing together experimental validation 被引量:1
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作者 Gang Li Chuande Zhao +2 位作者 Qian Yu Fang Yang Jie Chen 《Defence Technology(防务技术)》 SCIE EI CAS CSCD 2024年第4期313-327,共15页
Improving the energy conversion efficiency in metallic fuel(e.g.,Al)combustion is always desirable but challenging,which often involves redox reactions of aluminum(Al)with various mixed oxidizing environments.For inst... Improving the energy conversion efficiency in metallic fuel(e.g.,Al)combustion is always desirable but challenging,which often involves redox reactions of aluminum(Al)with various mixed oxidizing environments.For instance,Al-O reaction is the most common pathway to release limited energy while Al-F reaction has received much attentions to enhance Al combustion efficiency.However,microscopic understanding of the Al-O/Al-F reaction dynamics remains unsolved,which is fundamentally necessary to further improve Al combustion efficiency.In this work,for the first time,Al-O/Al-F reaction dynamic effects on the combustion of aluminum nanoparticles(n-Al)in oxygen/fluorine containing environments have been revealed via reactive molecular dynamics(RMD)simulations meshing together combustion experiments.Three RMD simulation systems of Al core/O_(2)/HF,n-Al/O_(2)/HF,and n-Al/O_(2)/CF4 with oxygen percentage ranging from 0%to 100%have been performed.The n-Al combustion in mixed O_(2)/CF_4 environments have been conducted by constant volume combustion experiments.RMD results show that Al-O reaction exhibits kinetic benefits while Al-F reaction owns thermodynamic benefits for n-Al combustion.In n-Al/O_(2)/HF,Al-O reaction gives faster energy release rate than Al-F reaction(1.1 times).The optimal energy release efficiency can be achieved with suitable oxygen percentage of 10%and 50%for n-Al/O_(2)/HF and n-Al/O_(2)/CF_4,respectively.In combustion experiments,90%of oxygen percentage can optimally enhance the peak pressure,pressurization rate and combustion heat.Importantly,Al-O reaction prefers to occur on the surface regions while Al-F reaction prefers to proceed in the interior regions of n-Al,confirming the kinetic/thermodynamic benefits of Al-O/Al-F reactions.The synergistic effect of Al-O/Al-F reaction for greatly enhancing n-Al combustion efficiency is demonstrated at atomicscale,which is beneficial for optimizing the combustion performance of metallic fuel. 展开更多
关键词 Al-O/Al—F reaction Kinetic benefits Thermodynamic benefits molecular dynamics COMBUSTION
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Synthesis,3D-QSAR and Molecular Docking of Hydroxamate Inhibitors
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作者 WU Kaiyue DUAN Wengui +3 位作者 MA Xianli LIN Guishan CUI Yucheng QIN Liqing 《林产化学与工业》 CAS CSCD 北大核心 2024年第6期83-95,共13页
In search of natural renewable resource-based bioactive molecules,20 hydroxamate inhibitors were designed and synthesized using cinamaldehyde as the starting material.Their structures were characterized by FT-IR,^(1)H... In search of natural renewable resource-based bioactive molecules,20 hydroxamate inhibitors were designed and synthesized using cinamaldehyde as the starting material.Their structures were characterized by FT-IR,^(1)HNMR,^(13)C NMR,and HRMS.And in vitro antifungal activity of the target compounds against 8 tested fungi was preliminarily evaluated by the agar dilution method.The bioassay results revealed that at the concentration of 50 mg/L,the target compounds exhibited certain inhibitory activity against 8 tested fungi,in which compounds 5r(R=o,o-Cl),5c(R=m-F),5b(R=o-F)and 5p(R=o,p-Cl)displayed better inhibitory activity of 93.3%,76.8%,75.3%and 72.3%,respectively,against P.piricola than that of the positive control chlorothalonil.At the same time,3D-quantitative structure-activity relationship(3D-QSAR)study was carried out to explore the relationship of the molecular structures with their antifungal activity against P.piricola.And a reasonable and effective 3D-QSAR model(r^(2)=0.980,q^(2)=0.501)has been established.Besides,molecular docking was also performed to reveal the binding mode of the target compound 5r(R=o,o-Cl)with succinate dehydrogenase(SDH).It was found that compound 5r could be well embedded in the active pocket of the receptor protein.This showed a similar mode with SDH inhibitors(SDHI)carboxin. 展开更多
关键词 HYDROXAMATE antifungal activity 3D-QSAR molecular docking
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Machine learning molecular dynamics simulations of liquid methanol
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作者 Jie Qian Junfan Xia Bin Jiang 《中国科学技术大学学报》 CAS CSCD 北大核心 2024年第6期12-21,I0009,I0010,共12页
As the simplest hydrogen-bonded alcohol,liquid methanol has attracted intensive experimental and theoretical interest.However,theoretical investigations on this system have primarily relied on empirical intermolecular... As the simplest hydrogen-bonded alcohol,liquid methanol has attracted intensive experimental and theoretical interest.However,theoretical investigations on this system have primarily relied on empirical intermolecular force fields or ab initio molecular dynamics with semilocal density functionals.Inspired by recent studies on bulk water using increasingly accurate machine learning force fields,we report a new machine learning force field for liquid methanol with a hybrid functional revPBE0 plus dispersion correction.Molecular dynamics simulations on this machine learning force field are orders of magnitude faster than ab initio molecular dynamics simulations,yielding the radial distribution functions,selfdiffusion coefficients,and hydrogen bond network properties with very small statistical errors.The resulting structural and dynamical properties are compared well with the experimental data,demonstrating the superior accuracy of this machine learning force field.This work represents a successful step toward a first-principles description of this benchmark system and showcases the general applicability of the machine learning force field in studying liquid systems. 展开更多
关键词 liquid methanol molecular dynamics machine learning hydrogen bond force field
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Study on the Mechanism of Nanopatterning in Printed Electronics Based on Molecular Dynamics Simulation
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作者 HUANG Hai-yang LI Yan ZHANG Run-liang 《印刷与数字媒体技术研究》 CAS 北大核心 2024年第4期237-244,共8页
In order to research the feasibility of using the selective adsorption principle to achieve automatic shaping of nano patterns,in this study,using the liquid gallium as the conductive ink and graphene as the printing ... In order to research the feasibility of using the selective adsorption principle to achieve automatic shaping of nano patterns,in this study,using the liquid gallium as the conductive ink and graphene as the printing plate surface,by changing the surface wettability of patterned areas on the nanoscale of graphene printed boards,the automatic formation of liquid gallium patterns on the graphene printed plate surface was simulated.The results indicated that liquid gallium can achieve automatic patterning on the surface of graphene patterned areas;the greater the interaction energy between gallium and carbon atoms,the clearer the pattern;gallium liquid is prone to remain in complex local positions of the pattern,making it difficult to shape the pattern;if the spacing between adjacent pattern lines is too large or too small,it will result in residual gallium liquid between the lines;increasing the thickness of the gallium film will cause the pattern to expand beyond the boundary,but increasing the thickness of the gallium film can also enhance the thickness and uniformity of the pattern lines.In summary,the principle of selective adsorption can be used to achieve the automatic formation of nano patterns,and the pattern formation effect is influenced by factors such as atomic interaction energy and pattern configuration. 展开更多
关键词 molecular dynamics Liquid gallium GRAPHENE Pattern forming
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Prolonging charge carrier lifetime via reinforcing molecular stacking for high-efficiency organic solar cells
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作者 BAI Ya-hui WANG Ke +5 位作者 WU Xiang-xi HE Dan LI Xiao-jun ZHANG Jian-qi LI Yong-fang ZHAO Fu-wen 《Journal of Central South University》 CSCD 2024年第12期4307-4318,共12页
Limited charge carrier lifetime(τ)leads to the short charge carrier diffusion length(L_(D))and thus impedes the improvement of power conversion efficiencies(PCEs)of organic solar cells(OSCs).Herein,anthracene(AN)as t... Limited charge carrier lifetime(τ)leads to the short charge carrier diffusion length(L_(D))and thus impedes the improvement of power conversion efficiencies(PCEs)of organic solar cells(OSCs).Herein,anthracene(AN)as the additive is introduced into classical donor:acceptor pairs to increase theτ.Introducing AN efficiently enhances the crystallinity of the PM 6:BTP-eC 9+blend film to reduce the trap density and increase theτto 1.484μs,achieving the prolonged L_(D).The prolonged L_(D) enables the PM 6:BTP-eC 9+blend film to gain weaker charge carrier recombination,reduced leakage current,and shorter charge carrier extraction time in devices,compared with PM 6:BTP-eC 9 counterparts.Therefore,PM 6:BTP-eC 9+based OSCs achieve higher PCEs of 18.41%±0.16%than PM 6:BTP-eC 9 based ones(17.08%±0.11%).Moreover,the PM 6:L 8-BO+based OSC presents an impressive PCE of 19.14%.It demonstrates that introducing AN is an efficient method to increase theτfor prolonged L_(D),boosting PCEs of OSCs. 展开更多
关键词 charge carrier diffusion length charge carrier lifetime molecular stacking organic solar cells
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虾青素生物利用度的影响因素及其改善方法研究进展
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作者 陈芳甜 谷彩霞 +2 位作者 周庆新 张勇 高慧 《肉类研究》 北大核心 2025年第7期73-80,共8页
虾青素因卓越的抗氧化和穿透血脑屏障特性,备受食品、保健品和医药等行业关注。然而,天然存在的虾青素受水不溶、易降解失活等因素影响,导致其生物利用度较低,应用受到严重限制。因此,研究改善虾青素生物利用度的策略意义重大。虾青素... 虾青素因卓越的抗氧化和穿透血脑屏障特性,备受食品、保健品和医药等行业关注。然而,天然存在的虾青素受水不溶、易降解失活等因素影响,导致其生物利用度较低,应用受到严重限制。因此,研究改善虾青素生物利用度的策略意义重大。虾青素的分子结构、食品基质效应及宿主状况等对虾青素的生物利用度具有重要影响。研究表明,通过优化食品加工过程、设计科学的运载体系和构建共消化体系等方法可以显著改善虾青素的生物利用度。本文从虾青素的吸收机制、生物利用度的影响因素及其改善方法等方面进行综述,并对虾青素生物利用度的研究趋势和前景进行展望。以期为探究虾青素营养功能及其终端产品开发提供参考。 展开更多
关键词 虾青素 生物利用度 分子结构 运载体系
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两种封管方法在双重血浆分子吸附系统联合血浆置换治疗肝衰竭患者中的比较
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作者 江尚燕 韩江英 +2 位作者 王云云 张骏飞 田柳 《实用医学杂志》 北大核心 2025年第15期2320-2324,共5页
目的探讨肝衰竭患者应用双重血浆分子吸附系统联合血浆置换治疗期间采用不同封管方法的效果比较。方法选择2022年1月至2024年10月收治的肝衰竭者120例,分为观察组和对照组各60例。两组均实施双重血浆分子吸附系统联合血浆置换的治疗方法... 目的探讨肝衰竭患者应用双重血浆分子吸附系统联合血浆置换治疗期间采用不同封管方法的效果比较。方法选择2022年1月至2024年10月收治的肝衰竭者120例,分为观察组和对照组各60例。两组均实施双重血浆分子吸附系统联合血浆置换的治疗方法,对照组患者应用肝素钠封管,观察组在肝素钠封管前加用鱼精蛋白。比较两组在肝功能相关指标[天门冬氨酸氨基转移酶(aspartate transaminase,AST)、丙氨酸氨基转移酶(alanine transaminase,ALT)、胆红素]、止凝血功能相关指标[纤维蛋白原、国际标准化比值(international normalized ratio,INR)]、血常规相关指标[血红蛋白(hemoglobin,Hb)]、堵管率与不良反应发生率上的差异。结果两组患者治疗后肝功能相关指标、止凝血功能相关指标、血常规相关指标组间比较,差异无统计学意义(P>0.05);观察组患者堵管率(3.33%)低于对照组堵管率(20.00%),差异有统计学意义(P<0.05);两组患者发生不良反应率比较,差异无统计学意义(P>0.05)。结论双重血浆分子吸附系统联合血浆置换治疗肝衰竭的过程,在肝素钠封管前使用鱼精蛋白对患者肝功能、血常规、止凝血功能及不良反应发生的影响小,但可以降低堵管率。 展开更多
关键词 肝功能衰竭 双重血浆分子吸附系统 血浆置换 鱼精蛋白 封管
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陆相页岩有机质-黏土矿物复合孔隙体系中多组分烃类-水混合物赋存的分子模拟--以四川盆地侏罗系自流井组大安寨段为例
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作者 任文希 曾小军 +2 位作者 王光付 郭建春 刘彧轩 《石油与天然气地质》 北大核心 2025年第1期304-314,共11页
针对四川盆地侏罗系陆相页岩气烃类组成多样的特点,建立了干酪根狭缝孔、伊利石狭缝孔和复合孔组成的有机质-黏土矿物复合孔隙体系分子模型。通过分子动力学模拟,研究了湿气在复合孔隙体系中的微观赋存特征及其影响因素。研究发现:①压... 针对四川盆地侏罗系陆相页岩气烃类组成多样的特点,建立了干酪根狭缝孔、伊利石狭缝孔和复合孔组成的有机质-黏土矿物复合孔隙体系分子模型。通过分子动力学模拟,研究了湿气在复合孔隙体系中的微观赋存特征及其影响因素。研究发现:①压力较低时,烃类分子会优先占据复合孔中靠近干酪根壁面的孔隙空间;而在高压条件下,分子数增加,较重的烃类分子会优先占据复合孔中靠近干酪根壁面的孔隙空间,使得轻质烃类只能在伊利石壁面处赋存。②在相同压力条件下,孔径越大,孔隙空间越大,可以容纳的烃类分子越多。③高压条件下水分子之间相互作用增强,并在氢键作用下聚集成团,团状水簇可赋存在干酪根表面,或游离于复合孔中,或形成水膜附着于伊利石表面。④有机质-黏土矿物复合孔隙体系中的有机质孔隙、复合孔和黏土矿物孔隙均对烃类赋存有贡献。相对于有机质孔隙,复合孔和黏土矿物孔隙能够容纳更多烃类分子,且以轻质烃类为主,含气性和可动性更好。 展开更多
关键词 干酪根 伊利石 湿气 分子模拟 复合孔隙体系 陆相页岩气 四川盆地
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推进成纤维细胞核素显像在心血管纤维化中的应用
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作者 杨敏福 霍力 李亚明 《中国医学影像技术》 北大核心 2025年第8期1378-1383,共6页
心肌纤维化(MF)是心血管疾病进展的核心病理基础,与不良预后密切相关。已有临床评估技术有创,特异性不足且难以早期识别MF。靶向活化成纤维细胞核素显像技术可在分子层面特异性识别MF,为无创早期诊断、疾病进程动态监测及治疗反应评估... 心肌纤维化(MF)是心血管疾病进展的核心病理基础,与不良预后密切相关。已有临床评估技术有创,特异性不足且难以早期识别MF。靶向活化成纤维细胞核素显像技术可在分子层面特异性识别MF,为无创早期诊断、疾病进程动态监测及治疗反应评估提供了新的视角。本文就成纤维细胞靶向核素显像在心血管疾病领域的科学基础、早期诊断效能证据及其用于MF风险分层、预后评估与治疗决策的应用潜力进行系统述评。 展开更多
关键词 心血管系统 成纤维细胞 酶激活 放射性核素显像 分子显像
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无底物情况下来自Rhodococcus zopfii的腈水解酶中亲核进攻试剂CYS165的活性状态的探究(英文)
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作者 张慧珠 高旭丹 梅晔 《南京大学学报(自然科学版)》 北大核心 2025年第1期129-139,共11页
腈水解酶作为一类在工业应用中具有巨大价值的绿色生物催化剂,能够高效地催化腈基化合物转化为羧酸.尽管其应用广泛,但腈水解酶的具体催化机制仍然不明确.先前的研究揭示了腈水解酶活性中心的GLU-LYS-GLU-CYS四联体在催化中起到关键作用... 腈水解酶作为一类在工业应用中具有巨大价值的绿色生物催化剂,能够高效地催化腈基化合物转化为羧酸.尽管其应用广泛,但腈水解酶的具体催化机制仍然不明确.先前的研究揭示了腈水解酶活性中心的GLU-LYS-GLU-CYS四联体在催化中起到关键作用,其中CYS残基作为亲核试剂攻击腈基,其硫醇基团的电离是反应中的一个关键步骤,然而,CYS的去质子化过程尚未被清晰揭示.研究聚焦于来自Rhodococcus zopfii(RzNIT)的腈水解酶,并研究了底物尚未进入酶活性位点时CYS165的质子化状态.通过对CYS165去质子化可能路径的详细分析,确认了在无底物状态下RzNIT中的CYS165处于中性状态.这一发现为进一步研究RzNIT的催化机制奠定了基础. 展开更多
关键词 ONIOM(the Own n-Layered Integrated molecular Orbital and molecular Mechanics) 腈水解酶 能垒 催化机制
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ChemRB:基于双向分子环约束的新型生成模型
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作者 王庆勇 唐良贵 +1 位作者 王振宇 辜丽川 《陕西师范大学学报(自然科学版)》 北大核心 2025年第1期45-59,共15页
在药物发现的早期阶段,深度生成模型正逐渐成为分子设计的关键工具。简化分子线输入系统(simplified moleaclar input line entry system,SMILES)作为标准的化学表示法,被广泛用于模型训练与生成。然而,由于分子环系统线性表示的非唯一... 在药物发现的早期阶段,深度生成模型正逐渐成为分子设计的关键工具。简化分子线输入系统(simplified moleaclar input line entry system,SMILES)作为标准的化学表示法,被广泛用于模型训练与生成。然而,由于分子环系统线性表示的非唯一性和非方向性,现有的单向编码器在捕捉样本全局语义结构和生成有效分子环时存在局限性。因此,提出一种名为Chemical RWKV BERT(ChemRB)的方法,旨在从海量的未标记数据中深度挖掘双向信息。为实现这一目标,创新性地设计了2个预训练任务:环级特征预测与全局跨度闭合预测。这些预训练任务不仅为模型提供了丰富多元的上下文信息,更进一步提升了其对复杂分子结构特性的深入理解。实验结果显示:ChemRB模型不仅在性能上取得了显著提升,而且在新分子/样本的评估指标上也达到了最优的基准性能。结果充分验证了ChemRB在精准捕获分子固有结构信息方面的有效性,为其在相关领域的应用提供了坚实的实证基础。最后,通过在EGFR抑制剂上的测试和应用,进一步验证了ChemRB模型的实用性和广泛应用前景。 展开更多
关键词 分子建模 分子生成 分子环系统 SMILES 深度学习
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WGM Lasing from Toroid-shaped ZnO Microdisk Pivoted on Si
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作者 ZHU Gangyi YAN Xinyue +6 位作者 YE Peng QIN Feifei WANG Zixuan LI Binghui LU Junfeng WANG Xiaoxuan XU Chunxiang 《发光学报》 北大核心 2025年第1期12-22,共11页
Although it has a significant advantage in gain properties,the lack of selective etching processes hinders ZnO lasing in on-chip applications.Herein,the circular ZnO microdisk pivoted on Si substrate is fabricated thr... Although it has a significant advantage in gain properties,the lack of selective etching processes hinders ZnO lasing in on-chip applications.Herein,the circular ZnO microdisk pivoted on Si substrate is fabricated through depositing ZnO on patterned silicon on an insulator(SOI)substrate.The cavity structure,morphology,and photoluminescence(PL)properties are studied systematically.The cavity shows a well-defined circular structure with oxygen vacancies.Under the synergistic action of surface tension and stress,the ZnO microdisk shows a unique toroid structure with a high sidewall surface finish.The ZnO microcavity(8μm in diameter)shows optically pumped whispering gallery modes(WGMs)lasing in the ultraviolet region with a Q factor exceeding 1300.More interestingly,the quality of the toroid ZnO microdisk cavity is high enough to support the bandgap renormalization(BGR)phenomenon.With the increasing pumping power,the lasing spectra will be modulated.The lasing spectrum undergoes a Burstein-Moss(BM)effect-induced blueshift and an electron-hole plasma(EHP)effect-induced redshift. 展开更多
关键词 ZNO MICRODISK tunable lasing molecular beam epitaxy
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Studies on the anti-hair loss mechanism of Aquilaria sinensis leaf extract by integrated metabolomics and network pharmacology
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作者 Zhengang Peng Zhengwan Huang +1 位作者 Zhe Liu Xiaoxiao Lin 《日用化学工业(中英文)》 北大核心 2025年第6期767-778,共12页
The anti-hair loss mechanism of Aquilaria sinensis leaf extract(ASE)has been studied by using metabolomics and network pharmacology.Metabolomics was utilized to comprehensively identify the active constituents of ASE,... The anti-hair loss mechanism of Aquilaria sinensis leaf extract(ASE)has been studied by using metabolomics and network pharmacology.Metabolomics was utilized to comprehensively identify the active constituents of ASE,and the network pharmacology was used to elucidate their anti-hair loss mechanism,which was verified by molecular docking technology.572 active compounds were identified from the ASE by metabolomics methods,where there are 1447 corresponding targets and 492 targets related to hair loss,totaling 88 targets.20 core active substances were identified by constructing a network between common targets and active substances,which include vanillic acid,chorionic acid,caffeic acid and apigenin.The five key targets of TNF,TP53,IL6,PPARG,and EGFR were screened out by the PPI network analysis on 88 common targets.The GO and KEGG pathway enrichment analysis showed that the inflammation,hormone balance,cell growth,proliferation,apoptosis,and oxidative stress are involved.Molecular docking studies have confirmed the high binding affinity between core active compounds and key targets.The drug similarity assessment on these core compounds suggested that they have the potential to be used as potential hair loss treatment drugs.This study elucidates the complex molecular mechanism of ASE in treating hair loss,and provides a reference for the future applications in hair care products. 展开更多
关键词 metabolomics network pharmacology hair loss Aquilaria sinensis leaf extract molecular docking
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