A novel quantitative structure-property relationship （QSPR） model for estimating the solution surface tension of 92 organic compounds at 20℃ was developed based on newly introduced atom-type topological indices. Th...A novel quantitative structure-property relationship （QSPR） model for estimating the solution surface tension of 92 organic compounds at 20℃ was developed based on newly introduced atom-type topological indices. The data set contained non-polar and polar liquids, and saturated and unsaturated compounds. The regression analysis shows that excellent result is obtained with multiple linear regression. The predictive power of the proposed model was discussed using the leave-one-out （LOO） cross-validated （CV） method. The correlation coefficient （R） and the leave-one-out cross-validation correlation coefficient （Rcv） of multiple linear regression model are 0.991 4 and 0.991 3, respectively. The new model gives the average absolute relative deviation of 1.81% for 92 substances. The result demonstrates that novel topological indices based on the equilibrium electro-negativity of atom and the relative bond length are useful model parameters for QSPR analysis of compounds.展开更多
The thermal decomposition temperature is one of the most important parameters to evaluate fire hazard of organic peroxide. A quantitative structure-property relationship model was proposed for estimating the thermal d...The thermal decomposition temperature is one of the most important parameters to evaluate fire hazard of organic peroxide. A quantitative structure-property relationship model was proposed for estimating the thermal decomposition temperatures of organic peroxides. The entire set of 38 organic peroxides was at random divided into a training set for model development and a prediction set for external model validation. The novel local molecular descriptors of AT1, AT2, AT3, AT4, AT5, AT6 and global molecular descriptor of ATC have been proposed in order to character organic peroxides’ molecular structures. An accurate quantitative structure-property relationship （QSPR） equation is developed for the thermal decomposition temperatures of organic peroxides. The statistical results showed that the QSPR model was obtained using the multiple linear regression （MLR） method with correlation coefficient （R）, standard deviation （S）, leave-one-out validation correlation coefficient （RCV） values of 0.9795, 6.5676 ℃ and 0.9328, respectively. The average absolute relative deviation （AARD） is only 3.86% for the experimental values. Model test by internal leave-one-out cross validation and external validation and molecular descriptor interpretation were discussed. Comparison with literature results demonstrated that novel local and global descriptors were useful molecular descriptors for predicting the thermal decomposition temperatures of organic peroxides.展开更多
This study was designed to develop hypothetical inhibition mechanism of novel UT-B inhibitor and exploit novel compounds with UT-B inhibitory activity and to obtain promising lead compounds. We integrated cell based h...This study was designed to develop hypothetical inhibition mechanism of novel UT-B inhibitor and exploit novel compounds with UT-B inhibitory activity and to obtain promising lead compounds. We integrated cell based high throughput screening and in silico method to identify an undiscovered UT-B inhibitor binding site and proposed the mechanism of UT-B inhibitor in cross-species. We employed high-throughput screening using an erythrocyte os- motic lysis assay and identified 4 compounds PU21, PU168, PU468 and PU474 with UT-B inhibitory activity in vitro from 2319 hits. 16 compounds with UT-B inhibitory activity were screened by erythrocyte osmotic lysis assay from 60 analogues of PU21. PU14, one of 16 compounds exhibited potential inhibition activity in human, rabbit, rat, mouse in vitro and pharmacological diuresis activity in vivo. Based on the physiological data, we built a compu- tational mode of human UT-B by homology modeling. The putative UT-B binding site was identified by structure- based drug design and validated by ligand-based and QSAR model. Additionally, UT-B structural and functional differences under inhibitors treated and untreated conditions were simulated by Molecular Dynamics （MD）. The UT-B inhibitor binding site analysis and validation provide structure basses for lead identification and optimization.展开更多
Flash point is a primary property used to determine the fire and explosion hazards of a liquid. New group contribution-based models were presented for estimation of the flash point of alkanes by the use of multiple li...Flash point is a primary property used to determine the fire and explosion hazards of a liquid. New group contribution-based models were presented for estimation of the flash point of alkanes by the use of multiple linear regression(MLR)and artificial neural network(ANN). This simple linear model shows a low average relative deviation(AARD) of 2.8% for a data set including 50(40 for training set and 10 for validation set) flash points. Furthermore, the predictive ability of the model was evaluated using LOO cross validation. The results demonstrate ANN model is clearly superior both in fitness and in prediction performance.ANN model has only the average absolute deviation of 2.9 K and the average relative deviation of 0.72%.展开更多
基金Projects(20775010,21075011) supported by the National Natural Science Foundation of ChinaProject(2008AA05Z405) supported by the National High Technology Research and Development Program of China+2 种基金Project(09JJ3016) supported by Hunan Provincial Natural Science Foundation,ChinaProject(09C066) supported by Scientific Research Fund of Hunan Provincial Education Department,ChinaProject(2010CL01) supported by the Foundation of Hunan Provincial Key Laboratory of Materials Protection for Electric Power and Transportation,China
文摘A novel quantitative structure-property relationship （QSPR） model for estimating the solution surface tension of 92 organic compounds at 20℃ was developed based on newly introduced atom-type topological indices. The data set contained non-polar and polar liquids, and saturated and unsaturated compounds. The regression analysis shows that excellent result is obtained with multiple linear regression. The predictive power of the proposed model was discussed using the leave-one-out （LOO） cross-validated （CV） method. The correlation coefficient （R） and the leave-one-out cross-validation correlation coefficient （Rcv） of multiple linear regression model are 0.991 4 and 0.991 3, respectively. The new model gives the average absolute relative deviation of 1.81% for 92 substances. The result demonstrates that novel topological indices based on the equilibrium electro-negativity of atom and the relative bond length are useful model parameters for QSPR analysis of compounds.
基金Project(2015SK20823) supported by Science and Technology Project of Hunan Province,ChinaProject(15A001) supported by Scientific Research Fund of Hunan Provincial Education Department,China+2 种基金Project(2017CL06) supported by Hunan Provincial Key Laboratory of Materials Protection for Electric Power and Transportation,ChinaProject(k1403029-11) supported by Science and Technology Project of Changsha City,ChinaProject(CX2015B372) supported by the Hunan Provincial Innovation Foundation for Postgraduate,China
文摘The thermal decomposition temperature is one of the most important parameters to evaluate fire hazard of organic peroxide. A quantitative structure-property relationship model was proposed for estimating the thermal decomposition temperatures of organic peroxides. The entire set of 38 organic peroxides was at random divided into a training set for model development and a prediction set for external model validation. The novel local molecular descriptors of AT1, AT2, AT3, AT4, AT5, AT6 and global molecular descriptor of ATC have been proposed in order to character organic peroxides’ molecular structures. An accurate quantitative structure-property relationship （QSPR） equation is developed for the thermal decomposition temperatures of organic peroxides. The statistical results showed that the QSPR model was obtained using the multiple linear regression （MLR） method with correlation coefficient （R）, standard deviation （S）, leave-one-out validation correlation coefficient （RCV） values of 0.9795, 6.5676 ℃ and 0.9328, respectively. The average absolute relative deviation （AARD） is only 3.86% for the experimental values. Model test by internal leave-one-out cross validation and external validation and molecular descriptor interpretation were discussed. Comparison with literature results demonstrated that novel local and global descriptors were useful molecular descriptors for predicting the thermal decomposition temperatures of organic peroxides.
文摘This study was designed to develop hypothetical inhibition mechanism of novel UT-B inhibitor and exploit novel compounds with UT-B inhibitory activity and to obtain promising lead compounds. We integrated cell based high throughput screening and in silico method to identify an undiscovered UT-B inhibitor binding site and proposed the mechanism of UT-B inhibitor in cross-species. We employed high-throughput screening using an erythrocyte os- motic lysis assay and identified 4 compounds PU21, PU168, PU468 and PU474 with UT-B inhibitory activity in vitro from 2319 hits. 16 compounds with UT-B inhibitory activity were screened by erythrocyte osmotic lysis assay from 60 analogues of PU21. PU14, one of 16 compounds exhibited potential inhibition activity in human, rabbit, rat, mouse in vitro and pharmacological diuresis activity in vivo. Based on the physiological data, we built a compu- tational mode of human UT-B by homology modeling. The putative UT-B binding site was identified by structure- based drug design and validated by ligand-based and QSAR model. Additionally, UT-B structural and functional differences under inhibitors treated and untreated conditions were simulated by Molecular Dynamics （MD）. The UT-B inhibitor binding site analysis and validation provide structure basses for lead identification and optimization.
基金Projects(21376031,21075011)supported by the National Natural Science Foundation of ChinaProject(2012GK3058)supported by the Foundation of Hunan Provincial Science and Technology Department,China+2 种基金Project supported by the Postdoctoral Science Foundation of Central South University,ChinaProject(2014CL01)supported by the Foundation of Hunan Provincial Key Laboratory of Materials Protection for Electric Power and Transportation,ChinaProject supported by the Innovation Experiment Program for University Students of Changsha University of Science and Technology,China
文摘Flash point is a primary property used to determine the fire and explosion hazards of a liquid. New group contribution-based models were presented for estimation of the flash point of alkanes by the use of multiple linear regression(MLR)and artificial neural network(ANN). This simple linear model shows a low average relative deviation(AARD) of 2.8% for a data set including 50(40 for training set and 10 for validation set) flash points. Furthermore, the predictive ability of the model was evaluated using LOO cross validation. The results demonstrate ANN model is clearly superior both in fitness and in prediction performance.ANN model has only the average absolute deviation of 2.9 K and the average relative deviation of 0.72%.
