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Molecular,cytological and morphological studies on Jassid resistance in cotton(Gossypium hirsutum L.)based on hairiness trait
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作者 SUBHASHINI Selvaraj KEERTHIVARMAN Krishnan +4 位作者 RAJESWARI Sivakami PREMALATHA N KALAIMAGAL T MUTHUSWAMI M JEYAKUMAR P 《Journal of Cotton Research》 2025年第2期205-212,共8页
Background Unravelling the relationship between trichome density and resistance to jassids in upland cotton,nine parental lines,viz.MCU 5,CO 14,CO 17,TCH 1828,KC 2,KC 3,GISV 323,GTHV 15–34,and RHC 1409 were obtained ... Background Unravelling the relationship between trichome density and resistance to jassids in upland cotton,nine parental lines,viz.MCU 5,CO 14,CO 17,TCH 1828,KC 2,KC 3,GISV 323,GTHV 15–34,and RHC 1409 were obtained from the Tamilnadu Agricultural University.These genotypes were subjected to molecular analysis using 27 primers,merely the JESPR 154 primer amplifying a 150-bp fragment in genotypes exhibiting the pubescence.Result This finding validated the association between pubescence and jassid resistance.Further analysis revealed that resistant genotypes(KC 3,GTHV 15–34,GISV 323,and RHC 1409)exhibited significantly higher trichome densities and length compared with susceptible genotypes.These results stalwartly support the hypothesis that trichomes play a pivotal role in conferring resistance to jassids in upland cotton.Conclusion By breeding cotton varieties with increased trichome density and length,it is possible to reduce jassid infestations,thereby decreasing the reliance on chemical pesticides and promoting a more sustainable agricultural environment. 展开更多
关键词 COTTON gossypium hirsutum L. TRICHOMES Jassids MOLECULAR
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棉花(Gossypium hirsutum L.)原生质体培养的体细胞胚胎发生及植株再生 被引量:9
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作者 佘建明 吴敬音 +4 位作者 周邗扬 王海波 陈志贤 李淑君 岳建雄 《江苏农业学报》 CSCD 1989年第4期54-60,共7页
以陆地棉(G.hirsutum L.)3118、晋棉4号和柯字棉312等3个品种为材料,取种子无菌苗的下胚轴诱导愈伤组织,建立胚性细胞悬浮培养系。以2%纤维素酶Ono-zuka RS和0.1%离析软化酶Y-23组成的混合酶液,从细胞悬浮培养物游离出原生质体。用含... 以陆地棉(G.hirsutum L.)3118、晋棉4号和柯字棉312等3个品种为材料,取种子无菌苗的下胚轴诱导愈伤组织,建立胚性细胞悬浮培养系。以2%纤维素酶Ono-zuka RS和0.1%离析软化酶Y-23组成的混合酶液,从细胞悬浮培养物游离出原生质体。用含低融点琼脂糖的K_3培养基包埋原生质体,采用园柱及薄层漂浮平板培养方式。3个品种的原生质体培养都得到了愈伤组织,其中晋棉4号和柯字棉312品种的愈伤组织转到低激素水平或无激素的MS-2培养基上诱导产生胚状体,胚状体在无激素的MS-1培养基上形成了植株。 展开更多
关键词 棉花 原生质体 培养 植株再生
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施氮量对不同开花期棉(Gossypium hirsutum L.)铃纤维细度和成熟度形成的影响 被引量:2
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作者 赵文青 孟亚利 +4 位作者 陈兵林 王友华 朱丽丽 王飞飞 周治国 《植物营养与肥料学报》 CAS CSCD 北大核心 2011年第5期1212-1219,共8页
为兼顾试验的重复性和生态区域性,选用高品质棉(科棉1号)和常规棉(美棉33B)品种为材料,于2005年分别在江苏南京(118°50'E,32°02'N,长江流域下游棉区)和江苏徐州(117°11'E,34°15'N,黄河流域黄淮棉区... 为兼顾试验的重复性和生态区域性,选用高品质棉(科棉1号)和常规棉(美棉33B)品种为材料,于2005年分别在江苏南京(118°50'E,32°02'N,长江流域下游棉区)和江苏徐州(117°11'E,34°15'N,黄河流域黄淮棉区)设置施氮量(低氮N 0 kg/hm2;适氮N 240 kg/hm2;高氮N 480 kg/hm2)试验,研究施氮量对不同开花期棉铃纤维细度、成熟度和马克隆值形成的影响。结果表明,(1)施氮量显著影响棉纤维细度、成熟度和马克隆值的形成过程,但三者在不同开花期对氮素水平的响应不同,施氮量与开花期对棉纤维细度、成熟度和马克隆值的形成存在互作效应。8月10日前开花的棉铃,铃期[花后0~50 d(DPA)]日均温在23.3℃以上,纤维细度、马克隆值以N 0 kg/hm2施氮量下最大,棉纤维马克隆值与纤维细度的相关性较大;8月25日开花的棉铃(铃期日均温在20.8~23.3℃之间),纤维成熟度、马克隆值以N 240 kg/hm2施氮量下最大;9月10日开花棉铃(铃期日均温低于20.8℃),纤维细度、成熟度和马克隆值均以N 480 kg/hm2最大,棉纤维马克隆值与纤维成熟度的相关性增强。(2)影响不同开花期间纤维细度、成熟度和马克隆值的主要因素是铃期日均温;最终纤维细度、成熟度和马克隆值在不同施氮量之间的变异与不同开花期(铃期日均温不同)间的变异比较,前者显著小于后者。综上,因开花期不同而形成的铃期日均温是决定纤维细度、成熟度和马克隆值的最重要因素,施氮量可通过对位叶叶氮浓度NA影响棉纤维细度、成熟度和马克隆值的形成过程,增加施氮量可减小上述指标在不同开花期间的差异。 展开更多
关键词 棉花 施氮量 开花期 纤维细度 纤维成熟度 纤维马克隆值
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中棉所12(Gossypium hirsutum C.V.Zhongmian 12)体细胞胚发生及植株再生 被引量:2
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作者 何道一 李雅志 王桂荣 《核农学报》 CAS CSCD 1998年第6期332-336,共5页
通过对不同外植体的研究,发现幼胚下胚轴是理想的外植体材料;2,4D和ZT是中棉所12体细胞胚发生的关键植物生长调节物。从愈伤组织诱导到大量再生植株只需4个月左右的时间。
关键词 中棉所12 体细胞胚胎发生 植株再生 棉花
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棉花(Gossypium hirsutum L.)花粉壁的发育 被引量:2
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作者 王毅 娄成后 《作物学报》 CAS CSCD 北大核心 1994年第3期277-281,T003,共6页
用光镜和透射电镜观察研究了棉花花粉壁的发育过程.棉花花粉壁的发生始于四分孢子时期,四分体形成后,在小孢子的质膜与胼胝质壁之间逐渐形成多糖性质的原外壁.游离小孢子时期,在一定间隔的原外壁中小孢子质膜表面积累外壁物质并形成基粒... 用光镜和透射电镜观察研究了棉花花粉壁的发育过程.棉花花粉壁的发生始于四分孢子时期,四分体形成后,在小孢子的质膜与胼胝质壁之间逐渐形成多糖性质的原外壁.游离小孢子时期,在一定间隔的原外壁中小孢子质膜表面积累外壁物质并形成基粒棒,之后在基粒棒的下部和上部分别横向延展并接合形成基足层和覆盖层.花粉内壁发生时期较晚,大约在大液泡形成之前.但内层和外层花粉壁均在小孢子有丝分裂之前同时建成.构建花粉壁的物质主要来自绒毡层的周原质团和小孢子原生质体的代谢分泌.小孢子胞质中在四分体时期形成的巨型内质网复合体是较为特殊的细胞结构,在游离小孢子时期,巨型内质网不断产生大量的内含微粒物的运输小泡,这种小囊泡表现出向质膜趋向运动并进一步与质膜融合.推测由内质网复合体产生的这些小囊泡是小孢子原生质体向质膜外运输花粉壁构建物质的主要形式. 展开更多
关键词 棉花 小孢子 花粉壁 内质网
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An Integrated Genetic,Physical and Transcript Map of Homoeologous Chromosomes 12 and 26 in Upland Cotton(Gossypium hirsutum L.) 被引量:2
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作者 KOHEL Russell J CHO Jaemin TOMKINS Jeffrey YU John Z 《棉花学报》 CSCD 北大核心 2008年第S1期22-,共1页
While Upland cotton(Gossypium hirsutum L.) represents 95% of the world production,its genetic improvement is hindered by the shortage of effective genomic tools and resources.The
关键词 An Integrated Genetic Physical and Transcript Map of Homoeologous Chromosomes 12 and 26 in Upland Cotton gossypium hirsutum L
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Selection and Characterization of a Novel Glyphosate Tolerant Upland Cotton(Gossypium hirsutum L.) Mutant(R1098) 被引量:1
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作者 DAUD M K 《棉花学报》 CSCD 北大核心 2008年第S1期88-,共1页
Stepwise selection approach was adopted to obtain glyphosate-tolerant upland cotton mutant(R1098) from the embryogenic calli of Coker 312(Gossypium hirsutum L.).The calli were transferred to selection medium and multi... Stepwise selection approach was adopted to obtain glyphosate-tolerant upland cotton mutant(R1098) from the embryogenic calli of Coker 312(Gossypium hirsutum L.).The calli were transferred to selection medium and multi-step selection pressure process was carried out until the 展开更多
关键词 line Selection and Characterization of a Novel Glyphosate Tolerant Upland Cotton gossypium hirsutum L MUTANT
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Thellungiella halophila ST103 enhances salt tolerance in Gossypium hirsutum 被引量:1
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作者 JAVAID Ayesha NAZISH Tahmina +7 位作者 ALI Mohsin ZHU Yonghong LI Jing ZHANG Huangyang WU Jie XIANG Chengbin WU Shenjie ALFATIH Alamin 《Journal of Cotton Research》 2022年第2期153-163,共11页
Background:Cotton(Gossypium hirsutum),the major textile fiber crop ofthe world,is negatively affected by salinity.It leads to the induction of adverse effects on growth and development of cott on.The overall yield of ... Background:Cotton(Gossypium hirsutum),the major textile fiber crop ofthe world,is negatively affected by salinity.It leads to the induction of adverse effects on growth and development of cott on.The overall yield of cotton faces major drawback once they are grown in saline soil.To improve cotton salt tolerance,tunsgenic approach offers a fast and effective way but it relies on the availability of salt tolerance genes.Results:In this study,we have reported the evaluation of ThST103,a homologue of Arabidopsis ozone-induced protein(AtOZI1)in Thellungiellahalophila,in enhancing salt tolerance in cotton.Overexpression ofThST103 enabled cotton plants to germinate and grow better than the wild types under salt stress.The transgenic lines showed enhanced survival rate in the saline environment and experienced less oxidative damage compared with the wild types.In the field,the transgenic cotton lines produced higher yield than the wild type in saline soil.Transcriptomic comparison analyses of ThST103 overexpression lines versus the wild type revealed upregulated genes enriched in salt stress tolerance and ion homeostasis.Conclusions:Our results dem on strate that ThST103 has the capability to improve salt tolerance in cotton.It can be used in cotton breeding for salt tolerance cultivars. 展开更多
关键词 SALINITY Thellungiella halophila ThSTl03 Ozone-induced protein Salt toleranee Cotton(gossypium hirsutum)
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Introduction of Bacillus thuringiensis(Bt)gene does not reduce potassium use efficiency of Bt transgenic cotton(Gossypium hirsutum L.) 被引量:1
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作者 WANG Qianqian YAN Wei +7 位作者 ZHANG Yichi ZHAN Manman LUO Xiaoli ENEJI AEgrinya ZHANG Anhong XIAO Juanli LI Fangjun TIAN Xiaoli 《Journal of Cotton Research》 CAS 2022年第3期274-284,共11页
Background:Potassium(K)deficiency has become a common field production problem following the widespread adoption of Bacillus thuringiensis(Bt)transgenic cotton(Gossypium hirsutum L.)worldwide.The purpose of this study... Background:Potassium(K)deficiency has become a common field production problem following the widespread adoption of Bacillus thuringiensis(Bt)transgenic cotton(Gossypium hirsutum L.)worldwide.The purpose of this study was to clarify whether the introduction of Bt gene directly reduces the K-use efficiency of cotton to induce K deficiency.Results:The cotton variety,Jihe 321(wild type,WT)and its two Bt(Cry1Ac)-transgenic overexpression lines(OE-29317,OE-29312)were studied in field with low soil-test K+(47.8 mg·kg^(−1)).In the field with low soil-test K+,only OE-29317 had less biomass and K+accumulation than the WT at some growth stages.Both Bt lines produced similar or even greater seed cotton yield than WT in the field.When the Bt gene(~70%)in OE-29317 and OE-29312 plants was silenced by virus-induced gene silencing(VIGS),the VIGS-Bt plants did not produce more biomass than VIGSgreen fluorescent protein(control)plants.Conclusions:The introduction of Bt gene did not necessarily hinder the K use efficiency of the cotton lines under this study. 展开更多
关键词 Biomass Bt(Bacillus thuringiensis)gene Cotton(gossypium hirsutum L.) K uptake K utilization index Yield
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Dynamic profiles of DNA methylation and the interaction with histone acetylation during fiber cell initiation of Gossypium hirsutum 被引量:1
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作者 CHEN Guangyu LI Yonghui +3 位作者 WEI Zhenzhen GAN Lei LIU Jisheng WANG Zhi 《Journal of Cotton Research》 2022年第1期34-47,共14页
Background:Fiber,as the main product of cotton,provides main raw material for the textile industry.Many key factors have been revealed a significant role in fiber cell development including Myb proteins,phytohormones,... Background:Fiber,as the main product of cotton,provides main raw material for the textile industry.Many key factors have been revealed a significant role in fiber cell development including Myb proteins,phytohormones,fatty acid metabolites,and epigenetic modifications.DNA methylation is one of the important epigenetic modifications to regulate plant development and responses to abiotic or biotic stimuli.In general,DNA methylation consisting of 5mC and 6mA regulates the chromatin structure and gene transcription to affect plant development,however,the detailed role and underlying mechanism of DNA methylation in the fiber development of cotton are yet vague.Results:Here,systematical study of the 5mC and 6mA DNA methylation profiles during the fiber initiation period of Xu142 and its glabrous mutant Xu142fl represented a clear alteration of global DNA methylation associated with fiber cell initiation.Then,the genome-wide identification of genes responsible for methylation regulation at the fifth carbon of cytosine and the sixth carbon of adenine of DNA was operated in Gossypium hirsutum.As a result,13,10,6,and 17 genes were identified for 5mC methylation,5mC demethylation,6mA methylation,and 6mA demethylation,respectively.We then investigated the tissue expression pattern of all these genes,and some genes showed higher expression levels in fiber initiation,among which some displayed a significant change in transcription between Xu142 and Xu142fl.The possible interaction between histone acetylation and DNA methylation in fiber initiation through in vitro culture was studied by dot blot,and the results showed that repressed histone deacetylation by Trichostatin A(TSA)inhibited the global DNA methylation,and some causal genes(e.g.,GhDMT13,GhDAMT2,GhALKBH12,GhDM7)were also identified.Conclusions:In this study,all the findings indicated the interplay between histone acetylation and DNA methylation,supporting their important roles and providing precious clues for the epigenetic modifications associated with DNA methylation in the fiber development of cotton. 展开更多
关键词 Fiber initiation DNA methylation Histone acetylation gossypium hirsutum
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Cloning and Characterization of a Tau Glutathione S-transferase Subunit Encoding Gene in Gossypium hirsutum 被引量:3
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作者 MA Zhi-ying,LI Zhi-kun,WANG Xing-fen,MA Jun,ZHANG Gui-yin(Agricultural University of Hebei,Baoding 071001,China) 《棉花学报》 CSCD 北大核心 2008年第S1期61-,共1页
A predicted tau glutathione S-transferase(GST) subunit encoding gene,named GhGST,was isolated from Gossypium hirsutum with RACE method from SSH library based on Verticillium
关键词 Cloning and Characterization of a Tau Glutathione S-transferase Subunit Encoding Gene in gossypium hirsutum
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Characters and structures of the nucleobase-ascorbate transporters(NAT)family genes in Gossypium hirsutum and their roles in responding to salt and drought stresses 被引量:1
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作者 GUO Lixue ZHAO Lanjie +9 位作者 LU Xuke CHEN Xiugui WANG Shuai WANG Junjuan WANG Delong YIN Zujun CHEN Chao FAN Yapeng ZHANG Yuexin YE Wuwei 《Journal of Cotton Research》 2022年第2期115-129,共15页
Background: Nucleobase-ascorbate transporters(NAT), synonymously called nucleobase-cation symporter 2(NCS2) proteins, were earlier reported to be involved in plant growth, development and resistance to stress. Previou... Background: Nucleobase-ascorbate transporters(NAT), synonymously called nucleobase-cation symporter 2(NCS2) proteins, were earlier reported to be involved in plant growth, development and resistance to stress. Previous studies concluded that s a polymorphic SNP associated with NAT12 was significant di erent between salt-tolerant and salt-sensitive materials of upland cotton. In current study, a comprehensive analysis of NAT family genes was conducted for the first time in cotton.Results: In this study, we discovered 32, 32, 18, and 16 NAT genes in Gossypium hirsutum, G. barbadense, G. raimondii and G. arboreum, respectively, which were classified into four groups(groups I–IV) based on the multiple sequence analysis. These GhNAT genes were unevenly distributed on At and Dt sub-genome in G. hirsutum. Most GhNAT members in the same group had similar gene structure characteristics and motif composition. The collinearity analysis revealed segmental duplication as well as tandem duplication contributing to the expansion of the GhNATs. The analysis of cis-acting regulatory elements of GhNATs showed that the function of GhNAT genes in cotton might be related to plant hormone and stress response. Under di erent conditions, the expression levels further suggested the GhNAT family genes were associated with plant response to various abiotic stresses. GhNAT12 was detected in the plasma membrane. And it was validated that the GhNAT12 gene played an important role in regulating cotton resistance to salt and drought stress through the virus-induced gene silencing(VIGS) analysis.Conclusions: A comprehensive analysis of NAT gene family was performed in cotton, including phylogenetic analysis, chromosomal location, collinearity analysis, motifs, gene structure and so on. Our results will further broaden the insight into the evolution and potential functions of NAT genes in cotton. Current findings could make significant contribution towards screening more candidate genes related to biotic and abiotic resistance for the improvement in cotton. 展开更多
关键词 gossypium hirsutum NAT gene family VIGS Salt and drought stresses
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Genome-wide identification and expression analysis of the GhIQD gene family in upland cotton(Gossypium hirsutum L.) 被引量:2
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作者 DOU Lingling LV Limin +15 位作者 KANG Yangyang TIAN Ruijie HUANG Deqing LI Jiayin LI Siyi LIU Fengping CAO Lingyan JIN Yuhua LIU Yang LI Huaizhu WANG Wenbo PANG Chaoyou SHANG Haihong ZOU Changsong SONG Guoli XIAO Guanghui 《Journal of Cotton Research》 2021年第1期24-37,共14页
Background:Calmodulin(CaM)is one of the most important Ca^(2+)signaling receptors because it regulates diverse physiological and biochemical reactions in plants.CaM functions by interacting with CaM-binding proteins(C... Background:Calmodulin(CaM)is one of the most important Ca^(2+)signaling receptors because it regulates diverse physiological and biochemical reactions in plants.CaM functions by interacting with CaM-binding proteins(CaMBPs)to modulate Ca^(2+)signaling.IQ domain(IQD)proteins are plant-specific CaMBPs that bind to CaM by their specific CaM binding sites.Results:In this study,we identified 102 GhIQD genes in the Gossypium hirsutum L.genome.The GhIQD gene family was classified into four clusters(Ⅰ,Ⅱ,Ⅲ,andⅣ),and we then mapped the GhIQD genes to the G.hirsutum L.chromosomes.Moreover,we found that 100 of the 102 GhIQD genes resulted from segmental duplication events,indicating that segmental duplication is the main force driving GhIQD gene expansion.Gene expression pattern analysis showed that a total of 89 GhIQD genes expressed in the elongation stage and second cell wall biosynthesis stage of the fiber cells,suggesting that GhIQD genes may contribute to fiber cell development in cotton.In addition,we found that 20 selected GhIQD genes were highly expressed in various tissues.Exogenous application of MeJA significantly enhanced the expression levels of GhIQD genes.Conclusions:Our study shows that GhIQD genes are involved in fiber cell development in cotton and are also widely induced by MeJA.Thw results provide bases to systematically characterize the evolution and biological functions of GhIQD genes,as well as clues to breed better cotton varieties in the future. 展开更多
关键词 gossypium hirsutum L. GhIQD genes Segmental duplication Expression analysis
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Mapping of QTL for Fiber Length Using Interspecific Gossypium hirsutum × G.barbadense F_2 Population
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作者 PREETHA S RAVEENDRAN T S 《棉花学报》 CSCD 北大核心 2008年第S1期64-,共1页
Cotton occupies a pre-eminent place among cash crops as it guides the destiny of a large section of the farming community as well as that of a flourishing textile industry.As the yarn manufacturing industry has underg... Cotton occupies a pre-eminent place among cash crops as it guides the destiny of a large section of the farming community as well as that of a flourishing textile industry.As the yarn manufacturing industry has undergone a technological revolution,more emphasis is given to quality of the raw 展开更多
关键词 G.barbadense F2 Population length Mapping of QTL for Fiber Length Using Interspecific gossypium hirsutum
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Biochemical Genetic Mechanism and QTLs of Early Maturing without Yield Loss in Short-season Upland Cotton(Gossypium hirsutum L.)
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作者 SONG Mei-zhen,YU Shu-xun,FAN Shu-li(Cotton Research Institute,Chinese Academy of Agricultural Sciences Key Laboratory of Cotton Genetic Improvement,Ministry of Agriculture,Anyang,Henan 455000,China) 《棉花学报》 CSCD 北大核心 2008年第S1期68-,共1页
The short season cotton(SSC) was important Upland plant ecotype(Gossypium hirsutum L.).The growth of SSC was very short that is 105 ~ 110 days(after planting). SSC could increase
关键词 QTLS Biochemical Genetic Mechanism and QTLs of Early Maturing without Yield Loss in Short-season Upland Cotton gossypium hirsutum L
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Agrobacterium-meditated Genetic Transformation of an Upland Cotton(Gossypium hirsutum cv Coker 310) Using a Novel Bt Gene Cry2Ac
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作者 THIRUVENGADAM V RASHMI J A UDYASURIAN V BALASUBRAMANIAN P RAVEENDRAN T S 《棉花学报》 CSCD 北大核心 2008年第S1期66-,共1页
The development of transgenic cotton varieties resistant to bollworms has been a major success of applying plant genetic engineering technology to agriculture,evidenced by phenomenal increase in
关键词 Using a Novel Bt Gene Cry2Ac Agrobacterium-meditated Genetic Transformation of an Upland Cotton gossypium hirsutum cv Coker 310
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Cloning and Function Characteristic of GhDWF4,an Ortholog of Arabidopsis DWF4 from Upland Cotton(Gossypium hirsutum L.)
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作者 HU Ming-yu,LUO Ming,TAN Kun-ling,XIAO Zhong-yi,PEI Yan(Key Laboratory of Biotechnology and Crop Quality Improvement,Ministry of Agriculture,Biotechnology Research Center,Southwest University,Chongqing 400716,China) 《棉花学报》 CSCD 北大核心 2008年第S1期60-,共1页
As one of the longest cells characterized in plant kingdom,cotton fibers were regarded as an ideal material for studying plant cell growth and development.In recent years,several reports revealed
关键词 BRs gossypium hirsutum L
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Heat Stress Related Gene Expression in Gossypium hirsutum L.
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作者 DEMIREL Ufuk GR M Atilla +1 位作者 KARAKU Mehmet MEMON Abdul Rezaque 《棉花学报》 CSCD 北大核心 2008年第S1期38-,共1页
Abiotic stress is a major limiting factor to crop productivity,and heat stress is one of the important elements for reduced crop production.Plants respond to heat stress at molecular and cellular levels as well as phy... Abiotic stress is a major limiting factor to crop productivity,and heat stress is one of the important elements for reduced crop production.Plants respond to heat stress at molecular and cellular levels as well as physiological level.Heat stress alters expression patterns of numerous genes in plants. 展开更多
关键词 ESTS Heat Stress Related Gene Expression in gossypium hirsutum L
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Global Annotation of Small RNA and MicroRNA Mature Sequences from Developing Ovules of Gossypium hirsutum L.
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作者 ABDURAKHMONOV Ibrokhim Y DEVOR Eric J BURIEV Zabardast T MAKAMOV Abdusalom SHERMATOV Shukhrat E ABDUKARIMOV Abdusattor 《棉花学报》 CSCD 北大核心 2008年第S1期11-,共1页
The involvement of small RNAs in cotton fiber development is under explored.The objective of this work was to directly clone,annotate,and analyze small RNAs of developing ovules to reveal
关键词 Global Annotation of Small RNA and MicroRNA Mature Sequences from Developing Ovules of gossypium hirsutum L RNA
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Genome-wide association study of micronaire using a natural population of representative upland cotton(Gossypium hirsutum L.)
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作者 SONG Jikun PEI Wenfeng +10 位作者 MA Jianjiang YANG Shuxian JIA Bing BIAN Yingying XIN Yue WU Luyao ZANG Xinshan QU Yanying ZHANG Jinfa WU Man YU Jiwen 《Journal of Cotton Research》 2021年第2期114-125,共12页
Background: Micronaire is a comprehensive index reflecting the fineness and maturity of cotton fiber.Micronaire is one of the important internal quality indicators of the cotton fiber and is closely related to the val... Background: Micronaire is a comprehensive index reflecting the fineness and maturity of cotton fiber.Micronaire is one of the important internal quality indicators of the cotton fiber and is closely related to the value of the cotton fiber.Understanding the genetic basis of micronaire is required for the genetic improvement of the trait.However,the genetic architecture of micronaire at the genomic level is unclear.The present genome-wide association study(GWAS)aimed to identify the genetic mechanism of the micronaire trait in 83 representa:tive upland cotton lines grown in multiple environments.Results GWAS of micronaire used 83 upland cotton accessions assayed by a Cotton 63 K Illumina Infinium single nucleotide polymorphism(SNP)array.A total of 11 quantitative trait loci(QTLs)for micronaire were detected on 10 chromosomes.These 11 QTLs included 27 identified genes with specific expression patterns.A novel QTL,qFM-A12–1,included 12 significant SNPs,and GhFLA9 was identified as a candidate gene based on haplotype block analysis and on strong and direct linkage disequilibrium between the significantly related SNPs and gene.GhFLA9 was expressed at a high level during secondary wall thickening at 20∼25 days post-anthesis.The expression level of GhFLA9 was significantly higher in the low micronaire line(Msco-12)than that in the high micronaire line(Chuangyou-9).Conclusions: This study provides a genetic reference for genetic improvement of cotton fiber micronaire and a foundation for verification of the functions of GhFLA9. 展开更多
关键词 Upland cotton(gossypium hirsutum L.) Fiber micronaire GWAS Candidate genes GhFLA9
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